RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 BPHLQ86WA6 291 aaPredicted RBP10.27□□□□□ -0.77
CD44-227ENST00000528086 DCUN1D3Q8IWE4 304 aa10.27□□□□□ -0.77
CD44-227ENST00000528086 KLHL7Q8IXQ5 586 aa10.27□□□□□ -0.77
CD44-227ENST00000528086 OR2L8Q8NGY9 312 aa10.27□□□□□ -0.77
CD44-227ENST00000528086 ADAMTS17Q8TE56 1095 aa10.27□□□□□ -0.77
CD44-227ENST00000528086 STAMBPL1Q96FJ0 436 aa10.27□□□□□ -0.77
CD44-227ENST00000528086 LRFN5Q96NI6 719 aa10.27□□□□□ -0.77
CD44-227ENST00000528086 SLC22A11Q9NSA0 550 aa10.27□□□□□ -0.77
CD44-227ENST00000528086 GEMIN8Q9NWZ8 242 aaKnown RBP10.27□□□□□ -0.77
CD44-227ENST00000528086 SOHLH2Q9NX45 425 aa10.27□□□□□ -0.77
CD44-227ENST00000528086 PCDHB3Q9Y5E6 796 aa10.27□□□□□ -0.77
CD44-227ENST00000528086 RELNP78509 3460 aa10.27□□□□□ -0.77
CD44-227ENST00000528086 IGKV1-8A0A0C4DH67 115 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 A0A0J9YY10 115 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 MAGEB16A2A368 324 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 PYCARD-AS1I3L0S3 204 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 MEN1O00255 615 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 RASGRF2O14827 1237 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 ZNF749O43361 778 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 CTSVO60911 334 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 PSIP1O75475 530 aaKnown RBP10.26□□□□□ -0.77
CD44-227ENST00000528086 CBSLP0DN79 551 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 ERVK-10P10266 1014 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 TCN2P20062 427 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 CBSP35520 551 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 PPARGP37231 505 aaPredicted RBP10.26□□□□□ -0.77
CD44-227ENST00000528086 POLE2P56282 527 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 CBLBQ13191 982 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 CUL1Q13616 776 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 ERV3-1Q14264 604 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 CRYMQ14894 314 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 KIR2DS3Q14952 304 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 FASTKD3Q14CZ7 662 aaKnown RBP10.26□□□□□ -0.77
CD44-227ENST00000528086 CYP2A13Q16696 494 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 KLHL38Q2WGJ6 581 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 DEFB109BQ30KR1 87 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 PTCHD3Q3KNS1 767 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 RBM20Q5T481 1227 aaKnown RBP10.26□□□□□ -0.77
CD44-227ENST00000528086 MRNIPQ6NTE8 343 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 HIBCHQ6NVY1 386 aaPredicted RBP10.26□□□□□ -0.77
CD44-227ENST00000528086 ZNF449Q6P9G9 518 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 OTOAQ7RTW8 1153 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 TMEM126BQ8IUX1 230 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 LRRC56Q8IYG6 542 aaPredicted RBP10.26□□□□□ -0.77
CD44-227ENST00000528086 ZBTB2Q8N680 514 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 C2CD4AQ8NCU7 369 aaPredicted RBP10.26□□□□□ -0.77
CD44-227ENST00000528086 OR2A1Q8NGT9 310 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 OR8K5Q8NH50 307 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 HMGCLL1Q8TB92 370 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 CD200R1Q8TD46 325 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 GRK7Q8WTQ7 553 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 ZNF285Q96NJ3 590 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 PANX3Q96QZ0 392 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 TTC1Q99614 292 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 NAPGQ99747 312 aaPredicted RBP10.26□□□□□ -0.77
CD44-227ENST00000528086 EBNA1BP2Q99848 306 aaKnown RBP10.26□□□□□ -0.77
CD44-227ENST00000528086 TRIM55Q9BYV6 548 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 ACTL8Q9H568 366 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 ENAMQ9NRM1 1142 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 INTS10Q9NVR2 710 aaKnown RBP10.26□□□□□ -0.77
CD44-227ENST00000528086 ANAPC5Q9UJX4 755 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 FBXO5Q9UKT4 447 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 KCNMB2Q9Y691 235 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 SAR1BQ9Y6B6 198 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 TEX264Q9Y6I9 313 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 DOCK10Q96BY6 2186 aa10.26□□□□□ -0.77
CD44-227ENST00000528086 NBASA2RRP1 2371 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 ISM1B1AKI9 464 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 GFYI3L273 518 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 MYO1CO00159 1063 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 CPNE3O75131 537 aaKnown RBP10.25□□□□□ -0.77
CD44-227ENST00000528086 KATNA1O75449 491 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 CREG1O75629 220 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 KLF7O75840 302 aaPredicted RBP10.25□□□□□ -0.77
CD44-227ENST00000528086 SEC31AO94979 1220 aaKnown RBP10.25□□□□□ -0.77
CD44-227ENST00000528086 C1QAP02745 245 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 PDGFAP04085 211 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 NR1D1P20393 614 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 MCM3P25205 808 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 PTPN4P29074 926 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 ATP5DP30049 168 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 GRIA3P42263 894 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 RPL21P46778 160 aaKnown RBP10.25□□□□□ -0.77
CD44-227ENST00000528086 ARL4DP49703 201 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 CDKN2DP55273 166 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 SARNPP82979 210 aaKnown RBP10.25□□□□□ -0.77
CD44-227ENST00000528086 C19orf57Q0VDD7 668 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 PPP1R7Q15435 360 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 TRADDQ15628 312 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 LONRF1Q17RB8 773 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 RNF187Q5TA31 235 aaPredicted RBP10.25□□□□□ -0.77
CD44-227ENST00000528086 CPZQ66K79 652 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 STEAP4Q687X5 459 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 C16orf46Q6P387 395 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 BORAQ6PGQ7 559 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 SDCCAG8Q86SQ7 713 aaPredicted RBP10.25□□□□□ -0.77
CD44-227ENST00000528086 HOOK3Q86VS8 718 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 CNTN4Q8IWV2 1026 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 SYTL1Q8IYJ3 562 aa10.25□□□□□ -0.77
CD44-227ENST00000528086 SHISA5Q8N114 240 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms