RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 PTGIRP43119 386 aa31.86■■■□□ 2.69
SSSCA1-205ENST00000527920 KCNAB2Q13303 367 aa31.86■■■□□ 2.69
SSSCA1-205ENST00000527920 PRAMEF17Q5VTA0 474 aa31.86■■■□□ 2.69
SSSCA1-205ENST00000527920 FAM199XQ6PEV8 388 aaPredicted RBP31.86■■■□□ 2.69
SSSCA1-205ENST00000527920 ZBTB2Q8N680 514 aa31.86■■■□□ 2.69
SSSCA1-205ENST00000527920 MR1Q95460 341 aa31.86■■■□□ 2.69
SSSCA1-205ENST00000527920 DPH2Q9BQC3 489 aaPredicted RBP31.86■■■□□ 2.69
SSSCA1-205ENST00000527920 PCMTD2Q9NV79 361 aa31.86■■■□□ 2.69
SSSCA1-205ENST00000527920 POLHQ9Y253 713 aa31.86■■■□□ 2.69
SSSCA1-205ENST00000527920 NFS1Q9Y697 457 aa31.86■■■□□ 2.69
SSSCA1-205ENST00000527920 AP1M2Q9Y6Q5 423 aa31.86■■■□□ 2.69
SSSCA1-205ENST00000527920 CTAGE9A4FU28 777 aa31.85■■■□□ 2.69
SSSCA1-205ENST00000527920 E5RI56 91 aa31.85■■■□□ 2.69
SSSCA1-205ENST00000527920 H3BMH7 237 aa31.85■■■□□ 2.69
SSSCA1-205ENST00000527920 RAB40ALP0C0E4 278 aa31.85■■■□□ 2.69
SSSCA1-205ENST00000527920 PGAM1P18669 254 aa31.85■■■□□ 2.69
SSSCA1-205ENST00000527920 DEFB109BQ30KR1 87 aa31.85■■■□□ 2.69
SSSCA1-205ENST00000527920 ATP1A1-AS1Q5TC04 95 aa31.85■■■□□ 2.69
SSSCA1-205ENST00000527920 SERBP1Q8NC51 408 aaKnown RBP eCLIP31.85■■■□□ 2.69
SSSCA1-205ENST00000527920 N4BP2L2Q92802 583 aaPredicted RBP31.85■■■□□ 2.69
SSSCA1-205ENST00000527920 KCNJ9Q92806 393 aa31.85■■■□□ 2.69
SSSCA1-205ENST00000527920 CLIP3Q96DZ5 547 aa31.85■■■□□ 2.69
SSSCA1-205ENST00000527920 IL17FQ96PD4 163 aa31.85■■■□□ 2.69
SSSCA1-205ENST00000527920 NAT9Q9BTE0 207 aa31.85■■■□□ 2.69
SSSCA1-205ENST00000527920 SLC25A18Q9H1K4 315 aa31.85■■■□□ 2.69
SSSCA1-205ENST00000527920 CHST8Q9H2A9 424 aa31.85■■■□□ 2.69
SSSCA1-205ENST00000527920 C20orf96Q9NUD7 363 aaPredicted RBP31.85■■■□□ 2.69
SSSCA1-205ENST00000527920 COMMD10Q9Y6G5 202 aa31.85■■■□□ 2.69
SSSCA1-205ENST00000527920 BOD1L1Q8NFC6 3051 aa31.84■■■□□ 2.69
SSSCA1-205ENST00000527920 SPTBP11277 2137 aa31.84■■■□□ 2.69
SSSCA1-205ENST00000527920 TTC4O95801 387 aa31.84■■■□□ 2.69
SSSCA1-205ENST00000527920 IVDP26440 423 aa31.84■■■□□ 2.69
SSSCA1-205ENST00000527920 ERV3-1Q14264 604 aa31.84■■■□□ 2.69
SSSCA1-205ENST00000527920 SYVN1Q86TM6 617 aa31.84■■■□□ 2.69
SSSCA1-205ENST00000527920 DENND6AQ8IWF6 608 aa31.84■■■□□ 2.69
SSSCA1-205ENST00000527920 DNAJC22Q8N4W6 341 aa31.84■■■□□ 2.69
SSSCA1-205ENST00000527920 FAM167BQ9BTA0 163 aa31.84■■■□□ 2.69
SSSCA1-205ENST00000527920 SPATA7Q9P0W8 599 aa31.84■■■□□ 2.69
SSSCA1-205ENST00000527920 RNF14Q9UBS8 474 aa31.84■■■□□ 2.69
SSSCA1-205ENST00000527920 FARSAQ9Y285 508 aaKnown RBP31.84■■■□□ 2.69
SSSCA1-205ENST00000527920 ZNF749O43361 778 aa31.83■■■□□ 2.69
SSSCA1-205ENST00000527920 SLC1A2P43004 574 aa31.83■■■□□ 2.69
SSSCA1-205ENST00000527920 CLCN7P51798 805 aa31.83■■■□□ 2.69
SSSCA1-205ENST00000527920 CTBP1Q13363 440 aa31.83■■■□□ 2.69
SSSCA1-205ENST00000527920 CNSTQ6PJW8 725 aa31.83■■■□□ 2.69
SSSCA1-205ENST00000527920 NEK10Q6ZWH5 1172 aa31.83■■■□□ 2.69
SSSCA1-205ENST00000527920 CAPZA3Q96KX2 299 aa31.83■■■□□ 2.69
SSSCA1-205ENST00000527920 CCDC68Q9H2F9 335 aa31.83■■■□□ 2.69
SSSCA1-205ENST00000527920 INTS7Q9NVH2 962 aaKnown RBP31.83■■■□□ 2.69
SSSCA1-205ENST00000527920 FBXO5Q9UKT4 447 aa31.83■■■□□ 2.69
SSSCA1-205ENST00000527920 KCNMB2Q9Y691 235 aa31.83■■■□□ 2.69
SSSCA1-205ENST00000527920 SMAPO00193 183 aa31.82■■■□□ 2.68
SSSCA1-205ENST00000527920 PRICKLE3O43900 615 aaPredicted RBP31.82■■■□□ 2.68
SSSCA1-205ENST00000527920 OR2B3O76000 313 aa31.82■■■□□ 2.68
SSSCA1-205ENST00000527920 PLA2G2AP14555 144 aa31.82■■■□□ 2.68
SSSCA1-205ENST00000527920 BDKRB1P46663 353 aa31.82■■■□□ 2.68
SSSCA1-205ENST00000527920 NFATC3Q12968 1075 aa31.82■■■□□ 2.68
SSSCA1-205ENST00000527920 CRYMQ14894 314 aa31.82■■■□□ 2.68
SSSCA1-205ENST00000527920 UGT8Q16880 541 aa31.82■■■□□ 2.68
SSSCA1-205ENST00000527920 TTLL9Q3SXZ7 439 aa31.82■■■□□ 2.68
SSSCA1-205ENST00000527920 SYTL1Q8IYJ3 562 aa31.82■■■□□ 2.68
SSSCA1-205ENST00000527920 RUFY1Q96T51 708 aa31.82■■■□□ 2.68
SSSCA1-205ENST00000527920 EBNA1BP2Q99848 306 aaKnown RBP31.82■■■□□ 2.68
SSSCA1-205ENST00000527920 NLNQ9BYT8 704 aa31.82■■■□□ 2.68
SSSCA1-205ENST00000527920 FBXO6Q9NRD1 293 aaPredicted RBP31.82■■■□□ 2.68
SSSCA1-205ENST00000527920 GALPQ9UBC7 116 aa31.82■■■□□ 2.68
SSSCA1-205ENST00000527920 CIDEBQ9UHD4 219 aa31.82■■■□□ 2.68
SSSCA1-205ENST00000527920 PLCL2Q9UPR0 1127 aa31.82■■■□□ 2.68
SSSCA1-205ENST00000527920 RUVBL2Q9Y230 463 aaKnown RBP31.82■■■□□ 2.68
SSSCA1-205ENST00000527920 SEC16AO15027 2179 aa31.81■■■□□ 2.68
SSSCA1-205ENST00000527920 CCDC188H7C350 402 aa31.81■■■□□ 2.68
SSSCA1-205ENST00000527920 FURINP09958 794 aa31.81■■■□□ 2.68
SSSCA1-205ENST00000527920 MAGP20916 626 aa31.81■■■□□ 2.68
SSSCA1-205ENST00000527920 MORF4L2Q15014 288 aa31.81■■■□□ 2.68
SSSCA1-205ENST00000527920 ACSBG2Q5FVE4 666 aa31.81■■■□□ 2.68
SSSCA1-205ENST00000527920 GABPB2Q8TAK5 448 aaPredicted RBP31.81■■■□□ 2.68
SSSCA1-205ENST00000527920 FAM136AQ96C01 138 aa31.81■■■□□ 2.68
SSSCA1-205ENST00000527920 SLC7A5P2Q9GIP4 190 aa31.81■■■□□ 2.68
SSSCA1-205ENST00000527920 SRPK3Q9UPE1 567 aa31.81■■■□□ 2.68
SSSCA1-205ENST00000527920 MED16Q9Y2X0 877 aa31.81■■■□□ 2.68
SSSCA1-205ENST00000527920 KLK4Q9Y5K2 254 aa31.81■■■□□ 2.68
SSSCA1-205ENST00000527920 ZSCAN9O15535 394 aaPredicted RBP31.8■■■□□ 2.68
SSSCA1-205ENST00000527920 HCRTR1O43613 425 aa31.8■■■□□ 2.68
SSSCA1-205ENST00000527920 PSIP1O75475 530 aaKnown RBP31.8■■■□□ 2.68
SSSCA1-205ENST00000527920 DR1Q01658 176 aa31.8■■■□□ 2.68
SSSCA1-205ENST00000527920 CYP2A13Q16696 494 aa31.8■■■□□ 2.68
SSSCA1-205ENST00000527920 DEFB110Q30KQ9 67 aa31.8■■■□□ 2.68
SSSCA1-205ENST00000527920 CCSMST1Q4G0I0 132 aa31.8■■■□□ 2.68
SSSCA1-205ENST00000527920 ZNF385CQ66K41 422 aaPredicted RBP31.8■■■□□ 2.68
SSSCA1-205ENST00000527920 RHBDD2Q6NTF9 364 aa31.8■■■□□ 2.68
SSSCA1-205ENST00000527920 TLDC1Q6P9B6 456 aa31.8■■■□□ 2.68
SSSCA1-205ENST00000527920 FAM198BQ6UWH4 519 aa31.8■■■□□ 2.68
SSSCA1-205ENST00000527920 KCNMB4Q86W47 210 aa31.8■■■□□ 2.68
SSSCA1-205ENST00000527920 LMNTD1Q8N9Z9 388 aa31.8■■■□□ 2.68
SSSCA1-205ENST00000527920 DENND1AQ8TEH3 1009 aa31.8■■■□□ 2.68
SSSCA1-205ENST00000527920 THAP4Q8WY91 577 aa31.8■■■□□ 2.68
SSSCA1-205ENST00000527920 ENAMQ9NRM1 1142 aa31.8■■■□□ 2.68
SSSCA1-205ENST00000527920 FAM114A2Q9NRY5 505 aa31.8■■■□□ 2.68
SSSCA1-205ENST00000527920 GCN1Q92616 2671 aaKnown RBP31.79■■■□□ 2.68
SSSCA1-205ENST00000527920 CDC14CA4D256 554 aa31.79■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms