RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 CYP2A13Q16696 494 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 CACHD1Q5VU97 1274 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 ANKS6Q68DC2 871 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 ADGRD1Q6QNK2 874 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 RAB11FIP2Q7L804 512 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 CMC1Q7Z7K0 106 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 CARFQ8N187 725 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 RAB42Q8N4Z0 105 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 AGBL5Q8NDL9 886 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 WDR36Q8NI36 951 aaKnown RBP12.51□□□□□ -0.41
SMPD1-202ENST00000526280 FLVCR1-AS1Q8TAF5 88 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 KLHL6Q8WZ60 621 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 CAVIN3Q969G5 261 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 CNTNAP3BQ96NU0 1288 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 OR2A14Q96R47 310 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 MAP3K3Q99759 626 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 CMKLR1Q99788 373 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 CCDC77Q9BR77 488 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 CNTNAP3Q9BZ76 1288 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 DERL2Q9GZP9 239 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 ZNF768Q9H5H4 540 aaKnown RBP12.51□□□□□ -0.41
SMPD1-202ENST00000526280 AKAP7Q9P0M2 348 aaPredicted RBP12.51□□□□□ -0.41
SMPD1-202ENST00000526280 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.51□□□□□ -0.41
SMPD1-202ENST00000526280 IKZF3Q9UKT9 509 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 SATB2Q9UPW6 733 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 CEP295Q9C0D2 2601 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 ACACBO00763 2458 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 ANKRD12Q6UB98 2062 aa12.51□□□□□ -0.41
SMPD1-202ENST00000526280 AKAP13Q12802 2813 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 CHD8Q9HCK8 2581 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 IGHV5-51A0A0C4DH38 117 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 PMS2P1A4D2B8 440 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 CDC7O00311 574 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 PLD2O14939 933 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 PRICKLE3O43900 615 aaPredicted RBP12.5□□□□□ -0.41
SMPD1-202ENST00000526280 RASSF9O75901 435 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 KRT38O76015 456 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 SLC16A8O95907 504 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 SYF2O95926 243 aaKnown RBP12.5□□□□□ -0.41
SMPD1-202ENST00000526280 SHBGP04278 402 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 SLC35E2BP0CK96 405 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 UGT2B7P16662 529 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 PEBP1P30086 187 aaKnown RBP12.5□□□□□ -0.41
SMPD1-202ENST00000526280 CSTF2P33240 577 aaKnown RBP eCLIP12.5□□□□□ -0.41
SMPD1-202ENST00000526280 HSD17B3P37058 310 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 SLC26A3P40879 764 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 LSSP48449 732 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 PHKG1Q16816 387 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 C3orf38Q5JPI3 329 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 SPESP1Q6UW49 350 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 SBSNQ6UWP8 590 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 RAPH1Q70E73 1250 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 TAOK1Q7L7X3 1001 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 CCDC91Q7Z6B0 441 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 FBXO39Q8N4B4 442 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 SPATA6LQ8N4H0 392 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 C2orf73Q8N5S3 287 aaPredicted RBP12.5□□□□□ -0.41
SMPD1-202ENST00000526280 LMNTD1Q8N9Z9 388 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 ZNF480Q8WV37 535 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 ISL2Q96A47 359 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 PRR11Q96HE9 360 aaPredicted RBP12.5□□□□□ -0.41
SMPD1-202ENST00000526280 CCDC138Q96M89 665 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 PPM1MQ96MI6 270 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 PITPNM3Q9BZ71 974 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 POLR1BQ9H9Y6 1135 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 SNX15Q9NRS6 342 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 C1GALT1Q9NS00 363 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 NOVA2Q9UNW9 492 aaKnown RBP12.5□□□□□ -0.41
SMPD1-202ENST00000526280 LOXL2Q9Y4K0 774 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 PCDHGA8Q9Y5G5 932 aa12.5□□□□□ -0.41
SMPD1-202ENST00000526280 A0A1W2PPV9 198 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 ZNF839A8K0R7 811 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 ISM1B1AKI9 464 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 AGRPO00253 132 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 ALDOAP04075 364 aaKnown RBP12.49□□□□□ -0.41
SMPD1-202ENST00000526280 MPOP05164 745 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 C2P06681 752 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 SNRPAP09012 282 aaKnown RBP12.49□□□□□ -0.41
SMPD1-202ENST00000526280 ENO2P09104 434 aaPredicted RBP12.49□□□□□ -0.41
SMPD1-202ENST00000526280 HIST1H2AGP0C0S8 130 aaPredicted RBP12.49□□□□□ -0.41
SMPD1-202ENST00000526280 HGFP14210 728 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 CD1DP15813 335 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 NELFEP18615 380 aaKnown RBP12.49□□□□□ -0.41
SMPD1-202ENST00000526280 HIST1H2ADP20671 130 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 CDH3P22223 829 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 TYK2P29597 1187 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 SERPINB8P50452 374 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 PNLIPRP1P54315 467 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 ATP6V0D1P61421 351 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 GPS2Q13227 327 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 FASTKQ14296 549 aaKnown RBP12.49□□□□□ -0.41
SMPD1-202ENST00000526280 SLC5A12Q1EHB4 618 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 LGSNQ5TDP6 509 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 KMT5CQ86Y97 462 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 GATA6Q92908 595 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 SLC22A18Q96BI1 424 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 SLC41A2Q96JW4 573 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 HIST1H2AHQ96KK5 128 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 HIST1H2AJQ99878 128 aa12.49□□□□□ -0.41
SMPD1-202ENST00000526280 H2AFJQ9BTM1 129 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms