RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 COL6A2P12110 1019 aa20.09■□□□□ 0.81
CD44-222ENST00000526025 HIST1H2ADP20671 130 aa20.09■□□□□ 0.81
CD44-222ENST00000526025 FOXC1Q12948 553 aa20.09■□□□□ 0.81
CD44-222ENST00000526025 PPP1R3AQ16821 1122 aa20.09■□□□□ 0.81
CD44-222ENST00000526025 ARHGAP22Q7Z5H3 698 aa20.09■□□□□ 0.81
CD44-222ENST00000526025 LINC01555Q8NAE3 123 aa20.09■□□□□ 0.81
CD44-222ENST00000526025 KIAA1191Q96A73 305 aa20.09■□□□□ 0.81
CD44-222ENST00000526025 HIST1H2AHQ96KK5 128 aa20.09■□□□□ 0.81
CD44-222ENST00000526025 HIST1H2AJQ99878 128 aa20.09■□□□□ 0.81
CD44-222ENST00000526025 H2AFJQ9BTM1 129 aa20.09■□□□□ 0.81
CD44-222ENST00000526025 TMEM109Q9BVC6 243 aa20.09■□□□□ 0.81
CD44-222ENST00000526025 SEMA6CQ9H3T2 930 aa20.09■□□□□ 0.81
CD44-222ENST00000526025 ACTR10Q9NZ32 417 aa20.09■□□□□ 0.81
CD44-222ENST00000526025 PLAGL1Q9UM63 463 aa20.09■□□□□ 0.81
CD44-222ENST00000526025 NEUROG3Q9Y4Z2 214 aa20.09■□□□□ 0.81
CD44-222ENST00000526025 HYAL3O43820 417 aaPredicted RBP20.08■□□□□ 0.81
CD44-222ENST00000526025 SLC16A8O95907 504 aa20.08■□□□□ 0.81
CD44-222ENST00000526025 POLR2CP19387 275 aaPredicted RBP20.08■□□□□ 0.81
CD44-222ENST00000526025 GFERP55789 205 aa20.08■□□□□ 0.81
CD44-222ENST00000526025 SHC2P98077 582 aa20.08■□□□□ 0.81
CD44-222ENST00000526025 TARDBPQ13148 414 aaKnown RBP eCLIP20.08■□□□□ 0.81
CD44-222ENST00000526025 CSHL1Q14406 222 aa20.08■□□□□ 0.81
CD44-222ENST00000526025 PHKG1Q16816 387 aa20.08■□□□□ 0.81
CD44-222ENST00000526025 FAM83EQ2M2I3 478 aa20.08■□□□□ 0.81
CD44-222ENST00000526025 CDKL4Q5MAI5 379 aa20.08■□□□□ 0.81
CD44-222ENST00000526025 IRGCQ6NXR0 463 aa20.08■□□□□ 0.81
CD44-222ENST00000526025 B3GNT8Q7Z7M8 397 aa20.08■□□□□ 0.81
CD44-222ENST00000526025 LCA5Q86VQ0 697 aa20.08■□□□□ 0.81
CD44-222ENST00000526025 KMT5CQ86Y97 462 aa20.08■□□□□ 0.81
CD44-222ENST00000526025 CENPLQ8N0S6 344 aaPredicted RBP20.08■□□□□ 0.81
CD44-222ENST00000526025 ACMSDQ8TDX5 336 aa20.08■□□□□ 0.81
CD44-222ENST00000526025 MZB1Q8WU39 189 aa20.08■□□□□ 0.81
CD44-222ENST00000526025 ATL1Q8WXF7 558 aa20.08■□□□□ 0.81
CD44-222ENST00000526025 CCDC74BQ96LY2 380 aa20.08■□□□□ 0.81
CD44-222ENST00000526025 TGM7Q96PF1 710 aa20.08■□□□□ 0.81
CD44-222ENST00000526025 PITPNM3Q9BZ71 974 aa20.08■□□□□ 0.81
CD44-222ENST00000526025 C1GALT1Q9NS00 363 aa20.08■□□□□ 0.81
CD44-222ENST00000526025 IGSF5Q9NSI5 407 aa20.08■□□□□ 0.81
CD44-222ENST00000526025 TMEM9Q9P0T7 183 aa20.08■□□□□ 0.81
CD44-222ENST00000526025 IKZF3Q9UKT9 509 aa20.08■□□□□ 0.81
CD44-222ENST00000526025 OARD1Q9Y530 152 aa20.08■□□□□ 0.81
CD44-222ENST00000526025 ADAMTS20P59510 1910 aa20.08■□□□□ 0.8
CD44-222ENST00000526025 CCDC187A0A096LP49 1063 aa20.07■□□□□ 0.8
CD44-222ENST00000526025 GSAPA4D1B5 854 aa20.07■□□□□ 0.8
CD44-222ENST00000526025 NPEPPSL1A6NEC2 478 aa20.07■□□□□ 0.8
CD44-222ENST00000526025 CDC7O00311 574 aa20.07■□□□□ 0.8
CD44-222ENST00000526025 PRICKLE3O43900 615 aaPredicted RBP20.07■□□□□ 0.8
CD44-222ENST00000526025 KLHL2O95198 593 aa20.07■□□□□ 0.8
CD44-222ENST00000526025 KPNA2P52292 529 aaKnown RBP20.07■□□□□ 0.8
CD44-222ENST00000526025 PNLIPRP1P54315 467 aa20.07■□□□□ 0.8
CD44-222ENST00000526025 TSNQ15631 228 aaKnown RBP20.07■□□□□ 0.8
CD44-222ENST00000526025 SLC5A12Q1EHB4 618 aa20.07■□□□□ 0.8
CD44-222ENST00000526025 PHF19Q5T6S3 580 aa20.07■□□□□ 0.8
CD44-222ENST00000526025 SPESP1Q6UW49 350 aa20.07■□□□□ 0.8
CD44-222ENST00000526025 FLVCR1-AS1Q8TAF5 88 aa20.07■□□□□ 0.8
CD44-222ENST00000526025 RHEBL1Q8TAI7 183 aa20.07■□□□□ 0.8
CD44-222ENST00000526025 ZNF480Q8WV37 535 aa20.07■□□□□ 0.8
CD44-222ENST00000526025 SMPDL3AQ92484 453 aa20.07■□□□□ 0.8
CD44-222ENST00000526025 IL17FQ96PD4 163 aa20.07■□□□□ 0.8
CD44-222ENST00000526025 ZNF768Q9H5H4 540 aaKnown RBP20.07■□□□□ 0.8
CD44-222ENST00000526025 ARL15Q9NXU5 204 aa20.07■□□□□ 0.8
CD44-222ENST00000526025 HEATR5BQ9P2D3 2071 aa20.06■□□□□ 0.8
CD44-222ENST00000526025 RFPL1O75677 317 aa20.06■□□□□ 0.8
CD44-222ENST00000526025 IMPA1P29218 277 aa20.06■□□□□ 0.8
CD44-222ENST00000526025 PRDX3P30048 256 aaKnown RBP20.06■□□□□ 0.8
CD44-222ENST00000526025 HNMTP50135 292 aa20.06■□□□□ 0.8
CD44-222ENST00000526025 CLDN6P56747 220 aa20.06■□□□□ 0.8
CD44-222ENST00000526025 IFFO1Q0D2I5 559 aa20.06■□□□□ 0.8
CD44-222ENST00000526025 DLG1Q12959 904 aa20.06■□□□□ 0.8
CD44-222ENST00000526025 TSNAXIP1Q2TAA8 658 aa20.06■□□□□ 0.8
CD44-222ENST00000526025 BEND6Q5SZJ8 279 aaPredicted RBP20.06■□□□□ 0.8
CD44-222ENST00000526025 KLC3Q6P597 504 aa20.06■□□□□ 0.8
CD44-222ENST00000526025 FBXO38Q6PIJ6 1188 aa20.06■□□□□ 0.8
CD44-222ENST00000526025 CLEC14AQ86T13 490 aa20.06■□□□□ 0.8
CD44-222ENST00000526025 ISCA2Q86U28 154 aa20.06■□□□□ 0.8
CD44-222ENST00000526025 STAG3L4Q8TBR4 150 aa20.06■□□□□ 0.8
CD44-222ENST00000526025 EPS8L3Q8TE67 593 aaKnown RBP20.06■□□□□ 0.8
CD44-222ENST00000526025 KLHL6Q8WZ60 621 aa20.06■□□□□ 0.8
CD44-222ENST00000526025 FBXL8Q96CD0 374 aa20.06■□□□□ 0.8
CD44-222ENST00000526025 OR2A14Q96R47 310 aa20.06■□□□□ 0.8
CD44-222ENST00000526025 NRTNQ99748 197 aa20.06■□□□□ 0.8
CD44-222ENST00000526025 CHRNA10Q9GZZ6 450 aa20.06■□□□□ 0.8
CD44-222ENST00000526025 AKAP7Q9P0M2 348 aaPredicted RBP20.06■□□□□ 0.8
CD44-222ENST00000526025 STOX2Q9P2F5 926 aaPredicted RBP20.06■□□□□ 0.8
CD44-222ENST00000526025 LGALS13Q9UHV8 139 aa20.06■□□□□ 0.8
CD44-222ENST00000526025 PLAAQ9Y263 795 aa20.06■□□□□ 0.8
CD44-222ENST00000526025 NCOR2Q9Y618 2525 aa20.05■□□□□ 0.8
CD44-222ENST00000526025 E7ENX8 843 aa20.05■□□□□ 0.8
CD44-222ENST00000526025 SYF2O95926 243 aaKnown RBP20.05■□□□□ 0.8
CD44-222ENST00000526025 UGT2B7P16662 529 aa20.05■□□□□ 0.8
CD44-222ENST00000526025 CCND1P24385 295 aa20.05■□□□□ 0.8
CD44-222ENST00000526025 OAS2P29728 719 aaKnown RBP20.05■□□□□ 0.8
CD44-222ENST00000526025 PEBP1P30086 187 aaKnown RBP20.05■□□□□ 0.8
CD44-222ENST00000526025 PPP1CAP62136 330 aa20.05■□□□□ 0.8
CD44-222ENST00000526025 TAP2Q03519 686 aa20.05■□□□□ 0.8
CD44-222ENST00000526025 ACAP2Q15057 778 aa20.05■□□□□ 0.8
CD44-222ENST00000526025 CACHD1Q5VU97 1274 aa20.05■□□□□ 0.8
CD44-222ENST00000526025 LRRC56Q8IYG6 542 aaPredicted RBP20.05■□□□□ 0.8
CD44-222ENST00000526025 IQCKQ8N0W5 287 aa20.05■□□□□ 0.8
CD44-222ENST00000526025 AGBL5Q8NDL9 886 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms