RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 USP9YO00507 2555 aaPredicted RBP11.37□□□□□ -0.59
CLNS1A-202ENST00000525064 PRRC2CQ9Y520 2896 aaKnown RBP11.37□□□□□ -0.59
CLNS1A-202ENST00000525064 SPTAN1Q13813 2472 aaKnown RBP11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 TCRBV7S3A2A0A539 114 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 BLACEA4D250 179 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 PRMT5O14744 637 aaPredicted RBP11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 CD3EAPO15446 510 aaKnown RBP11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 MAP3K7O43318 606 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 ALOX12BO75342 701 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 UMODP07911 640 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 RNF224P0DH78 156 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 MCM3P25205 808 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 MGAT1P26572 445 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 ARNTP27540 789 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 PSMB5P28074 263 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 TERF1P54274 439 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 BASP1P80723 227 aaKnown RBP11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 PLOD1Q02809 727 aaPredicted RBP11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 RPS6KA1Q15418 735 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 NKAIN1Q4KMZ8 207 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 PCID2Q5JVF3 399 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 CTSL3PQ5NE16 218 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 SLC6A19Q695T7 634 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 HIST2H2BCQ6DN03 193 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 JMJD6Q6NYC1 403 aaPredicted RBP11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 MRPL14Q6P1L8 145 aaKnown RBP11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 CES3Q6UWW8 571 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 MED25Q71SY5 747 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 PPP1R32Q7Z5V6 425 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 ATCAYQ86WG3 371 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 RAB43Q86YS6 212 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 DCUN1D3Q8IWE4 304 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 CCDC89Q8N998 374 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 TMEM102Q8N9M5 508 aaPredicted RBP11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 PROKR1Q8TCW9 393 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 SGSM3Q96HU1 749 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 SMAD5Q99717 465 aaKnown RBP11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 DHRS4Q9BTZ2 278 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 TSGA10Q9BZW7 698 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 IRAK4Q9NWZ3 460 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 SYBUQ9NX95 663 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 EURLQ9NYK6 297 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 GPR83Q9NYM4 423 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 IFT80Q9P2H3 777 aaPredicted RBP11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 TSR3Q9UJK0 312 aaKnown RBP11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 PLCL2Q9UPR0 1127 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 AP1M2Q9Y6Q5 423 aa11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 SPTBN1Q01082 2364 aaKnown RBP11.36□□□□□ -0.59
CLNS1A-202ENST00000525064 GOLGA8KD6RF30 607 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 GOLGA8TH3BQL2 631 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 RASGRF2O14827 1237 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 KRT86O43790 486 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 PRICKLE3O43900 615 aaPredicted RBP11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 SLCO2B1O94956 709 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 MED26O95402 600 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 F7P08709 466 aaPredicted RBP11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 FOLR3P41439 243 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 GRIA3P42263 894 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 DCDP81605 110 aaKnown RBP11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 SSPNQ14714 243 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 INPP5JQ15735 1006 aaPredicted RBP11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 CCNG2Q16589 344 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 PTRHD1Q6GMV3 140 aaKnown RBP11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 TLDC1Q6P9B6 456 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 UNC5DQ6UXZ4 953 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 COX15Q7KZN9 410 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 NLRP9Q7RTR0 991 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 MCATQ8IVS2 390 aaKnown RBP11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 EFCAB3Q8N7B9 438 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 OR2L8Q8NGY9 312 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 DENND1AQ8TEH3 1009 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 ASZ1Q8WWH4 475 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 PEX13Q92968 403 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 MFSD3Q96ES6 412 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 TTC1Q99614 292 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 TRIM56Q9BRZ2 755 aaKnown RBP11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 LZTFL1Q9NQ48 299 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 EIF2B3Q9NR50 452 aaKnown RBP11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 TXLNGQ9NUQ3 528 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 NDOR1Q9UHB4 597 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 GPN3Q9UHW5 284 aaPredicted RBP11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 SRPK3Q9UPE1 567 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 PADI2Q9Y2J8 665 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 PCDHGB7Q9Y5F8 929 aa11.35□□□□□ -0.59
CLNS1A-202ENST00000525064 DPM1O60762 260 aa11.34□□□□□ -0.59
CLNS1A-202ENST00000525064 CTSVO60911 334 aa11.34□□□□□ -0.59
CLNS1A-202ENST00000525064 VPS4BO75351 444 aa11.34□□□□□ -0.59
CLNS1A-202ENST00000525064 C1orf105O95561 183 aa11.34□□□□□ -0.59
CLNS1A-202ENST00000525064 FGGP02679 453 aa11.34□□□□□ -0.59
CLNS1A-202ENST00000525064 APOA4P06727 396 aa11.34□□□□□ -0.59
CLNS1A-202ENST00000525064 CD9P21926 228 aa11.34□□□□□ -0.59
CLNS1A-202ENST00000525064 TTPAP49638 278 aa11.34□□□□□ -0.59
CLNS1A-202ENST00000525064 RRADP55042 308 aa11.34□□□□□ -0.59
CLNS1A-202ENST00000525064 EIF3BP55884 814 aaKnown RBP11.34□□□□□ -0.59
CLNS1A-202ENST00000525064 YBX1P67809 324 aaKnown RBP11.34□□□□□ -0.59
CLNS1A-202ENST00000525064 MRPL49Q13405 166 aaKnown RBP11.34□□□□□ -0.59
CLNS1A-202ENST00000525064 TMED2Q15363 201 aa11.34□□□□□ -0.59
CLNS1A-202ENST00000525064 AARS2Q5JTZ9 985 aaKnown RBP11.34□□□□□ -0.59
CLNS1A-202ENST00000525064 DCAF10Q5QP82 559 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms