RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 CNPP09543 421 aaKnown RBP1.59□□□□□ -2.15
CD44-212ENST00000524922 TSPY3P0CV98 308 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 TSPY8P0CW00 308 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 GHRP10912 638 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 PDHBP11177 359 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 TNNT1P13805 278 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 MYOD1P15172 320 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 PTPN2P17706 415 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 FCARP24071 287 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 ELAVL4P26378 380 aaKnown RBP1.59□□□□□ -2.15
CD44-212ENST00000524922 TMOD1P28289 359 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 CCND2P30279 289 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 AXLP30530 894 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 HOXA13P31271 388 aaPredicted RBP1.59□□□□□ -2.15
CD44-212ENST00000524922 STX2P32856 288 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 EIF2DP41214 584 aaKnown RBP1.59□□□□□ -2.15
CD44-212ENST00000524922 ERVPABLB-1P60509 514 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 DYNLL1P63167 89 aaKnown RBP1.59□□□□□ -2.15
CD44-212ENST00000524922 TUBB4BP68371 445 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 RUNX1T1Q06455 604 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 GRIK3Q13003 919 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 PPFIA1Q13136 1202 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 BLMHQ13867 455 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 E2F5Q15329 346 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 ALX1Q15699 326 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 MAPK6Q16659 721 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 COL28A1Q2UY09 1125 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 EIF2S3LQ2VIR3 472 aaKnown RBP1.59□□□□□ -2.15
CD44-212ENST00000524922 CTXN3Q4LDR2 81 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 ZNF667Q5HYK9 610 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 RARS2Q5T160 578 aaKnown RBP1.59□□□□□ -2.15
CD44-212ENST00000524922 PLPP4Q5VZY2 271 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 HIST2H2BDQ6DRA6 164 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 SLC8B1Q6J4K2 584 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 IL20RBQ6UXL0 311 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 TPRG1Q6ZUI0 275 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 KRTAP5-2Q701N4 177 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 NIPA1Q7RTP0 329 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 TMCO2Q7Z6W1 182 aaPredicted RBP1.59□□□□□ -2.15
CD44-212ENST00000524922 TBC1D26Q86UD7 250 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 MOGAT3Q86VF5 341 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 ZNF410Q86VK4 478 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 ECHDC2Q86YB7 292 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 APLFQ8IW19 511 aaPredicted RBP1.59□□□□□ -2.15
CD44-212ENST00000524922 MFSD6LQ8IWD5 586 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 SMAP1Q8IYB5 467 aaPredicted RBP1.59□□□□□ -2.15
CD44-212ENST00000524922 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.59□□□□□ -2.15
CD44-212ENST00000524922 ZNF444Q8N0Y2 327 aaPredicted RBP1.59□□□□□ -2.15
CD44-212ENST00000524922 CPXCR1Q8N123 301 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 SLC34A3Q8N130 599 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 ZNF713Q8N859 430 aaPredicted RBP1.59□□□□□ -2.15
CD44-212ENST00000524922 DNAAF1Q8NEP3 725 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 RDM1Q8NG50 284 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 OLIG1Q8TAK6 271 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 FAM3CQ92520 227 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 GOLGA1Q92805 767 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 FGF13Q92913 245 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 FGF14Q92915 247 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 CEP295NLQ96MC4 621 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 PCYT2Q99447 389 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 P2RY13Q9BPV8 354 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 JPH2Q9BR39 696 aaPredicted RBP1.59□□□□□ -2.15
CD44-212ENST00000524922 MXRA8Q9BRK3 442 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 NUSAP1Q9BXS6 441 aaKnown RBP1.59□□□□□ -2.15
CD44-212ENST00000524922 NFKBIZQ9BYH8 718 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 CHMP4BQ9H444 224 aaKnown RBP1.59□□□□□ -2.15
CD44-212ENST00000524922 RNF41Q9H4P4 317 aaPredicted RBP1.59□□□□□ -2.15
CD44-212ENST00000524922 FAM124BQ9H5Z6 455 aaPredicted RBP1.59□□□□□ -2.15
CD44-212ENST00000524922 STN1Q9H668 368 aaKnown RBP1.59□□□□□ -2.15
CD44-212ENST00000524922 PRKRIP1Q9H875 184 aaPredicted RBP1.59□□□□□ -2.15
CD44-212ENST00000524922 KIF9Q9HAQ2 790 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 SAYSD1Q9NPB0 183 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 CISD1Q9NZ45 108 aaKnown RBP1.59□□□□□ -2.15
CD44-212ENST00000524922 ANKMY1Q9P2S6 941 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 IL17BQ9UHF5 180 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 DLGAP4Q9Y2H0 992 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 GDAQ9Y2T3 454 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 DERAQ9Y315 318 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 PCDHGB5Q9Y5G0 923 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 LCTP09848 1927 aa1.59□□□□□ -2.15
CD44-212ENST00000524922 COL4A2P08572 1712 aa1.59□□□□□ -2.16
CD44-212ENST00000524922 MCM3APO60318 1980 aa1.59□□□□□ -2.16
CD44-212ENST00000524922 ADGRG4Q8IZF6 3080 aa1.59□□□□□ -2.16
CD44-212ENST00000524922 SF3B1O75533 1304 aaKnown RBP eCLIP1.59□□□□□ -2.16
CD44-212ENST00000524922 ATXN2Q99700 1313 aaKnown RBP1.59□□□□□ -2.16
CD44-212ENST00000524922 ZNF532Q9HCE3 1301 aa1.59□□□□□ -2.16
CD44-212ENST00000524922 ASCC3Q8N3C0 2202 aaKnown RBP1.59□□□□□ -2.16
CD44-212ENST00000524922 MIA3Q5JRA6 1907 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 ANK2Q01484 3957 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 IGKV3D-15A0A087WSY6 115 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 IGKV6-21A0A0C4DH24 114 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 IGKV3D-20A0A0C4DH25 116 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 ESYT2A0FGR8 921 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 HEATR9A2RTY3 570 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 VWA3AA6NCI4 1184 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 ZBTB5O15062 677 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 TEX28O15482 410 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 CEP104O60308 925 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 ZNF217O75362 1048 aa1.58□□□□□ -2.16
CD44-212ENST00000524922 MBD4O95243 580 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms