RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 NR2C2APQ86WQ0 139 aa3.63□□□□□ -1.83
SKP1-212ENST00000523966 TMEM139Q8IV31 216 aa3.63□□□□□ -1.83
SKP1-212ENST00000523966 OR8H3Q8N146 312 aa3.63□□□□□ -1.83
SKP1-212ENST00000523966 NDUFAF2Q8N183 169 aa3.63□□□□□ -1.83
SKP1-212ENST00000523966 STPG4Q8N801 248 aa3.63□□□□□ -1.83
SKP1-212ENST00000523966 CNBD1Q8NA66 436 aa3.63□□□□□ -1.83
SKP1-212ENST00000523966 THAP8Q8NA92 274 aa3.63□□□□□ -1.83
SKP1-212ENST00000523966 MUS81Q96NY9 551 aa3.63□□□□□ -1.83
SKP1-212ENST00000523966 UHRF2Q96PU4 802 aa3.63□□□□□ -1.83
SKP1-212ENST00000523966 ARRDC1-AS1Q9H2J1 176 aa3.63□□□□□ -1.83
SKP1-212ENST00000523966 SNX25Q9H3E2 840 aa3.63□□□□□ -1.83
SKP1-212ENST00000523966 ZNF556Q9HAH1 456 aa3.63□□□□□ -1.83
SKP1-212ENST00000523966 MRGBPQ9NV56 204 aa3.63□□□□□ -1.83
SKP1-212ENST00000523966 LRWD1Q9UFC0 647 aa3.63□□□□□ -1.83
SKP1-212ENST00000523966 KCNG2Q9UJ96 466 aa3.63□□□□□ -1.83
SKP1-212ENST00000523966 ZNF580Q9UK33 172 aa3.63□□□□□ -1.83
SKP1-212ENST00000523966 MTUS1Q9ULD2 1270 aa3.63□□□□□ -1.83
SKP1-212ENST00000523966 NOL7Q9UMY1 257 aaKnown RBP3.63□□□□□ -1.83
SKP1-212ENST00000523966 POMT1Q9Y6A1 747 aa3.63□□□□□ -1.83
SKP1-212ENST00000523966 FLT1P17948 1338 aa3.63□□□□□ -1.83
SKP1-212ENST00000523966 PCDH11YQ9BZA8 1340 aa3.63□□□□□ -1.83
SKP1-212ENST00000523966 TRAV34A0A0B4J273 112 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 CCDC188H7C350 402 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 BMPR1BO00238 502 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 PTGESO14684 152 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 CIDEAO60543 219 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 SLU7O95391 586 aaKnown RBP3.62□□□□□ -1.83
SKP1-212ENST00000523966 VIMP08670 466 aaKnown RBP3.62□□□□□ -1.83
SKP1-212ENST00000523966 IGHV4-38-2P0DP08 117 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 HAPLN1P10915 354 aaPredicted RBP3.62□□□□□ -1.83
SKP1-212ENST00000523966 PAX1P15863 534 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 CD22P20273 847 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 CDH3P22223 829 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 MPZP25189 248 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 MARK3P27448 753 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 HOXC13P31276 330 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 RPL21P46778 160 aaKnown RBP3.62□□□□□ -1.83
SKP1-212ENST00000523966 ALDH3A2P51648 485 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 KRTAP10-11P60412 298 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 HERV-K104P61576 105 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 ROR1Q01973 937 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 RBBP5Q15291 538 aaKnown RBP3.62□□□□□ -1.83
SKP1-212ENST00000523966 PHKG1Q16816 387 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 TECRLQ5HYJ1 363 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 LRRC73Q5JTD7 316 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 DCAF10Q5QP82 559 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 C6orf136Q5SQH8 315 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 SPOUT1Q5T280 376 aaKnown RBP3.62□□□□□ -1.83
SKP1-212ENST00000523966 CYP4A22Q5TCH4 519 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 SLC35E4Q6ICL7 350 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 CAVIN1Q6NZI2 390 aaKnown RBP3.62□□□□□ -1.83
SKP1-212ENST00000523966 C18orf65Q6ZTR6 163 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 DNAJB7Q7Z6W7 309 aaPredicted RBP3.62□□□□□ -1.83
SKP1-212ENST00000523966 ISCA2Q86U28 154 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 C4orf19Q8IY42 314 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 LGI2Q8N0V4 545 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 NOA1Q8NC60 698 aaKnown RBP3.62□□□□□ -1.83
SKP1-212ENST00000523966 OR4K1Q8NGD4 311 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 FGFBP3Q8TAT2 258 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 HSD17B8Q92506 261 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 ALG14Q96F25 216 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 SLC47A1Q96FL8 570 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 RAD9AQ99638 391 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 KATNB1Q9BVA0 655 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 MMP28Q9H239 520 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 PELI2Q9HAT8 420 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 Q9N2K0 584 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 FGF21Q9NSA1 209 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 DAPK2Q9UIK4 370 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 TMED3Q9Y3Q3 217 aa3.62□□□□□ -1.83
SKP1-212ENST00000523966 SOS1Q07889 1333 aaPredicted RBP3.62□□□□□ -1.83
SKP1-212ENST00000523966 A0A1W2PPW3 197 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 FEZF1A0PJY2 475 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 HTR3EA5X5Y0 456 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 FAM72CH0Y354 149 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 DNM1LO00429 736 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 IGLV2-11P01706 119 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 PLA2G4BP0C869 781 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 LIFP15018 202 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 EFNA1P20827 205 aaPredicted RBP3.61□□□□□ -1.83
SKP1-212ENST00000523966 CA6P23280 308 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 DLX5P56178 289 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 DLK1P80370 383 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 MAT1AQ00266 395 aaKnown RBP3.61□□□□□ -1.83
SKP1-212ENST00000523966 ILF2Q12905 390 aaKnown RBP3.61□□□□□ -1.83
SKP1-212ENST00000523966 ILF3Q12906 894 aaKnown RBP eCLIP3.61□□□□□ -1.83
SKP1-212ENST00000523966 SCARB2Q14108 478 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 UGCGQ16739 394 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 CA9Q16790 459 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 UGT3A2Q3SY77 523 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 PHLDA2Q53GA4 152 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 C20orf194Q5TEA3 1177 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 FAM72AQ5TYM5 149 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 SHEQ5VZ18 495 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 FAM72DQ6L9T8 149 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 ZNF449Q6P9G9 518 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 DCLRE1AQ6PJP8 1040 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 SUSD1Q6UWL2 747 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 MSANTD1Q6ZTZ1 278 aa3.61□□□□□ -1.83
SKP1-212ENST00000523966 ANO5Q75V66 913 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms