RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	COLEC12	Q5KU26	742 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	ARMC3	Q5W041	872 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	CPZ	Q66K79	652 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	KIAA0930	Q6ICG6	404 aa	Predicted RBP	11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	MRNIP	Q6NTE8	343 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	CENPU	Q71F23	418 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	AGGF1	Q8N302	714 aa	eCLIP	11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	OR2L8	Q8NGY9	312 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	COG1	Q8WTW3	980 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	PANX3	Q96QZ0	392 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	TCF12	Q99081	682 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	DPH2	Q9BQC3	489 aa	Predicted RBP	11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	CLMP	Q9H6B4	373 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	GALP	Q9UBC7	116 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	ANAPC2	Q9UJX6	822 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	RUVBL2	Q9Y230	463 aa	Known RBP	11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	KLHL20	Q9Y2M5	609 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	NBAS	A2RRP1	2371 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	DOCK10	Q96BY6	2186 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	RASGRF2	O14827	1237 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	NRDC	O43847	1150 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	NIPSNAP2	O75323	286 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	KLF7	O75840	302 aa	Predicted RBP	11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	MATN4	O95460	622 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	C1orf105	O95561	183 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	MLN	P12872	115 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	MAG	P20916	626 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	PTGIR	P43119	386 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	MAGEA3	P43357	314 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	GCGR	P47871	477 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	CHAF1B	Q13112	559 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	NCF4	Q15080	339 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	TMED2	Q15363	201 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	RHBDD2	Q6NTF9	364 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	CCDC137	Q6PK04	289 aa	Known RBP	11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	OTOA	Q7RTW8	1153 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	TAX1BP1	Q86VP1	789 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	CILP2	Q8IUL8	1156 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	GPR135	Q8IZ08	494 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	SLC35F6	Q8N357	371 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	OTUD6B	Q8N6M0	293 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	MCU	Q8NE86	351 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	DENND1A	Q8TEH3	1009 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	GBP5	Q96PP8	586 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	MLXIPL	Q9NP71	852 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	IL1RAPL1	Q9NZN1	696 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	SNX7	Q9UNH6	387 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	PLCL2	Q9UPR0	1127 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	CRYL1	Q9Y2S2	319 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	AP1M2	Q9Y6Q5	423 aa		11.91	□□□□□ -0.5
VEGFA-223	ENST00000523125	ZCWPW2	A0A1B0GU75	182 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	FAM237B	A0A1B0GVD1	139 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	ARGFX	A6NJG6	315 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	SDR42E2	A6NKP2	422 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	PGRMC1	O00264	195 aa	Known RBP	11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	ZSCAN9	O15535	394 aa	Predicted RBP	11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	S1PR4	O95977	384 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	ESR1	P03372	595 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	OGN	P20774	298 aa	Known RBP	11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	BDKRB1	P46663	353 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	SARNP	P82979	210 aa	Known RBP	11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	ANKRD20A4	Q4UJ75	823 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	RNF187	Q5TA31	235 aa	Predicted RBP	11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	C1orf189	Q5VU69	101 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	FCRL6	Q6DN72	434 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	NEPRO	Q6NW34	567 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	TLDC1	Q6P9B6	456 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	ASB18	Q6ZVZ8	466 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	TMEM151B	Q8IW70	566 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	ZBTB2	Q8N680	514 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	ZNF655	Q8N720	491 aa	Predicted RBP	11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	HMGCLL1	Q8TB92	370 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	ACTRT1	Q8TDG2	376 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	N4BP2L2	Q92802	583 aa	Predicted RBP	11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	RAD51AP1	Q96B01	352 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	SLC22A18	Q96BI1	424 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	FAM136A	Q96C01	138 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	SERPINB12	Q96P63	405 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	OSBPL9	Q96SU4	736 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	SLC7A5P2	Q9GIP4	190 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	ING2	Q9H160	280 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	KCNF1	Q9H3M0	494 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	GRPEL1	Q9HAV7	217 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	EURL	Q9NYK6	297 aa		11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125	DHCR7	Q9UBM7	475 aa	Known RBP	11.9	□□□□□ -0.5
VEGFA-223	ENST00000523125		A0A1W2PPV9	198 aa		11.89	□□□□□ -0.51
VEGFA-223	ENST00000523125	MAGEB16	A2A368	324 aa		11.89	□□□□□ -0.51
VEGFA-223	ENST00000523125	GOLGA8M	H3BSY2	632 aa		11.89	□□□□□ -0.51
VEGFA-223	ENST00000523125	ZNF185	O15231	689 aa		11.89	□□□□□ -0.51
VEGFA-223	ENST00000523125	PHF2	O75151	1096 aa		11.89	□□□□□ -0.51
VEGFA-223	ENST00000523125	CNOT3	O75175	753 aa	Known RBP	11.89	□□□□□ -0.51
VEGFA-223	ENST00000523125	CEACAM4	O75871	244 aa		11.89	□□□□□ -0.51
VEGFA-223	ENST00000523125	F7	P08709	466 aa	Predicted RBP	11.89	□□□□□ -0.51
VEGFA-223	ENST00000523125	ITGAX	P20702	1163 aa		11.89	□□□□□ -0.51
VEGFA-223	ENST00000523125	AGXT	P21549	392 aa		11.89	□□□□□ -0.51
VEGFA-223	ENST00000523125	PSMB5	P28074	263 aa		11.89	□□□□□ -0.51
VEGFA-223	ENST00000523125	ATP5D	P30049	168 aa		11.89	□□□□□ -0.51
VEGFA-223	ENST00000523125	GRIA3	P42263	894 aa		11.89	□□□□□ -0.51
VEGFA-223	ENST00000523125	CCL11	P51671	97 aa		11.89	□□□□□ -0.51

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