RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 SLC9B2Q86UD5 537 aa11.58□□□□□ -0.56
PVT1-215ENST00000522963 GPSM1Q86YR5 675 aa11.58□□□□□ -0.56
PVT1-215ENST00000522963 TRIM48Q8IWZ4 208 aa11.58□□□□□ -0.56
PVT1-215ENST00000522963 FBXO15Q8NCQ5 510 aaPredicted RBP11.58□□□□□ -0.56
PVT1-215ENST00000522963 RHEBL1Q8TAI7 183 aa11.58□□□□□ -0.56
PVT1-215ENST00000522963 STAG3L4Q8TBR4 150 aa11.58□□□□□ -0.56
PVT1-215ENST00000522963 TCP10LQ8TDR4 215 aa11.58□□□□□ -0.56
PVT1-215ENST00000522963 EXT2Q93063 718 aa11.58□□□□□ -0.56
PVT1-215ENST00000522963 DEPDC7Q96QD5 511 aa11.58□□□□□ -0.56
PVT1-215ENST00000522963 PKP4Q99569 1192 aa11.58□□□□□ -0.56
PVT1-215ENST00000522963 SLC38A3Q99624 504 aa11.58□□□□□ -0.56
PVT1-215ENST00000522963 NRTNQ99748 197 aa11.58□□□□□ -0.56
PVT1-215ENST00000522963 MRPL57Q9BQC6 102 aaKnown RBP11.58□□□□□ -0.56
PVT1-215ENST00000522963 MRPL46Q9H2W6 279 aaKnown RBP11.58□□□□□ -0.56
PVT1-215ENST00000522963 LRRN3Q9H3W5 708 aa11.58□□□□□ -0.56
PVT1-215ENST00000522963 STN1Q9H668 368 aaKnown RBP11.58□□□□□ -0.56
PVT1-215ENST00000522963 SLC40A1Q9NP59 571 aa11.58□□□□□ -0.56
PVT1-215ENST00000522963 KCNK9Q9NPC2 374 aa11.58□□□□□ -0.56
PVT1-215ENST00000522963 POT1Q9NUX5 634 aa11.58□□□□□ -0.56
PVT1-215ENST00000522963 UTP6Q9NYH9 597 aaKnown RBP11.58□□□□□ -0.56
PVT1-215ENST00000522963 CPSF2Q9P2I0 782 aaKnown RBP11.58□□□□□ -0.56
PVT1-215ENST00000522963 SLC17A7Q9P2U7 560 aa11.58□□□□□ -0.56
PVT1-215ENST00000522963 GRID1Q9ULK0 1009 aa11.58□□□□□ -0.56
PVT1-215ENST00000522963 RNF112Q9ULX5 631 aa11.58□□□□□ -0.56
PVT1-215ENST00000522963 PLAGL1Q9UM63 463 aa11.58□□□□□ -0.56
PVT1-215ENST00000522963 TDRKHQ9Y2W6 561 aaKnown RBP11.58□□□□□ -0.56
PVT1-215ENST00000522963 PLLPQ9Y342 182 aa11.58□□□□□ -0.56
PVT1-215ENST00000522963 OARD1Q9Y530 152 aa11.58□□□□□ -0.56
PVT1-215ENST00000522963 COLEC10Q9Y6Z7 277 aa11.58□□□□□ -0.56
PVT1-215ENST00000522963 TRABD2BA6NFA1 517 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 UBXN8O00124 270 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 MYO1CO00159 1063 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 PPM1DO15297 605 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 PRPF4O43172 522 aaKnown RBP eCLIP11.57□□□□□ -0.568e-9■■■□□ 16.1
PVT1-215ENST00000522963 NUDT21O43809 227 aaKnown RBP11.57□□□□□ -0.56
PVT1-215ENST00000522963 MTHFD2P13995 350 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 MAP4P27816 1152 aaKnown RBP11.57□□□□□ -0.56
PVT1-215ENST00000522963 NDUFS1P28331 727 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 RPA3P35244 121 aaPredicted RBP11.57□□□□□ -0.56
PVT1-215ENST00000522963 FASLGP48023 281 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 HHEXQ03014 270 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 TGFBIQ15582 683 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 TTC23LQ6PF05 361 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 FOXR1Q6PIV2 292 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 UNQ6494/PRO21346Q6UXR6 183 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 USP53Q70EK8 1073 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 FRA10AC1Q70Z53 315 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 OR52E1Q8NGJ3 308 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 OR9A1PQ8NGU1 263 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 MAGEC3Q8TD91 643 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 MCOLN3Q8TDD5 553 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 JPH3Q8WXH2 748 aaPredicted RBP11.57□□□□□ -0.56
PVT1-215ENST00000522963 RAD51AP1Q96B01 352 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 IL17FQ96PD4 163 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 FAM111AQ96PZ2 611 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 MENTQ9BUN1 341 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 IQCGQ9H095 443 aaKnown RBP11.57□□□□□ -0.56
PVT1-215ENST00000522963 KIR3DX1Q9H7L2 352 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 RDH14Q9HBH5 336 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 MED4Q9NPJ6 270 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 KCNK4Q9NYG8 393 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 POLG2Q9UHN1 485 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 AK5Q9Y6K8 562 aa11.57□□□□□ -0.56
PVT1-215ENST00000522963 CHD8Q9HCK8 2581 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 A0A1W2PQM1 296 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 TMEM120BA0PK00 339 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 NCF1BA6NI72 391 aaPredicted RBP11.56□□□□□ -0.56
PVT1-215ENST00000522963 SYCE1LA8MT33 242 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 NCF1CA8MVU1 366 aaPredicted RBP11.56□□□□□ -0.56
PVT1-215ENST00000522963 SUPT3HB4E1H0 165 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 ACACBO00763 2458 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 ZW10O43264 779 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 SUPT3HO75486 399 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 GUCA1CO95843 209 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 HIST1H2AGP0C0S8 130 aaPredicted RBP11.56□□□□□ -0.56
PVT1-215ENST00000522963 NCF1P14598 390 aaPredicted RBP11.56□□□□□ -0.56
PVT1-215ENST00000522963 HIST1H2ADP20671 130 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 HPDP32754 393 aaPredicted RBP11.56□□□□□ -0.56
PVT1-215ENST00000522963 ETV4P43268 484 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 AP1S2P56377 157 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 CDKL1Q00532 357 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 GPR18Q14330 331 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 CCDC153Q494R4 210 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 HSP90B2PQ58FF3 399 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 CDCP2Q5VXM1 449 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 NKAIN2Q5VXU1 208 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 TMEM26Q6ZUK4 368 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 SPRED1Q7Z699 444 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 RBM12BQ8IXT5 1001 aaKnown RBP11.56□□□□□ -0.56
PVT1-215ENST00000522963 DCBLD1Q8N8Z6 715 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 ANKRD42Q8N9B4 389 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 LMNTD1Q8N9Z9 388 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 AVL9Q8NBF6 648 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 ARMC2Q8NEN0 867 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 DENND1AQ8TEH3 1009 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 ZFPM2Q8WW38 1151 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 AHCYL2Q96HN2 611 aaKnown RBP11.56□□□□□ -0.56
PVT1-215ENST00000522963 HIST1H2AHQ96KK5 128 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 CCDC138Q96M89 665 aa11.56□□□□□ -0.56
PVT1-215ENST00000522963 HIST1H2AJQ99878 128 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms