RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 MELKQ14680 651 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 RFTN1Q14699 578 aaPredicted RBP3.88□□□□□ -1.79
SKP1-209ENST00000522552 SYT16Q17RD7 645 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 ESCO2Q56NI9 601 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 PHYHD1Q5SRE7 291 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 TMEM63BQ5T3F8 832 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 B3GNTL1Q67FW5 361 aaPredicted RBP3.88□□□□□ -1.79
SKP1-209ENST00000522552 DENND2CQ68D51 928 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 KIRREL2Q6UWL6 708 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 BTNL8Q6UX41 500 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 ZNF813Q6ZN06 617 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 EFL1Q7Z2Z2 1120 aaKnown RBP3.88□□□□□ -1.79
SKP1-209ENST00000522552 ERASQ7Z444 233 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 ADGRD2Q7Z7M1 963 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 TAX1BP1Q86VP1 789 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 FAM228AQ86W67 206 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 KLHL36Q8N4N3 616 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 MDGA1Q8NFP4 955 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 BEST2Q8NFU1 509 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 GOLGA5Q8TBA6 731 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 HM13Q8TCT9 377 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 SNAPC3Q92966 411 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 ERLEC1Q96DZ1 483 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 DAZAP1Q96EP5 407 aaKnown RBP3.88□□□□□ -1.79
SKP1-209ENST00000522552 STAMBPL1Q96FJ0 436 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 SLC41A3Q96GZ6 507 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 DHTKD1Q96HY7 919 aaPredicted RBP3.88□□□□□ -1.79
SKP1-209ENST00000522552 SFXN2Q96NB2 322 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 COQ7Q99807 217 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 TUBA1CQ9BQE3 449 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 NMNAT2Q9BZQ4 307 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 PLEKHG2Q9H7P9 1386 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 CATSPERBQ9H7T0 1116 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 TRPC7Q9HCX4 862 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 DNAJC4Q9NNZ3 241 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 DPP3Q9NY33 737 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 GTSE1Q9NYZ3 720 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 FLRT1Q9NZU1 646 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 OR14J1Q9UGF5 321 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 KCNJ14Q9UNX9 436 aa3.88□□□□□ -1.79
SKP1-209ENST00000522552 LOC100653049A0A140TA62 436 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 TMEM202A6NGA9 273 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 TMEM221A6NGB7 291 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 DDTLA6NHG4 134 aaPredicted RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 WRBO00258 174 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 NVLO15381 856 aaKnown RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 TSPAN1O60635 241 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 KRT34O76011 436 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 FGFR1OPO95684 399 aaKnown RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 OTCP00480 354 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 AGTP01019 485 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 CSF2P04141 144 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 CYP1A1P04798 512 aaPredicted RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 CSN3P07498 182 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 NR2F6P10588 404 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 PAICSP22234 425 aaKnown RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 PIK3R1P27986 724 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 SLC1A3P43003 542 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 MAGEA1P43355 309 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 LIMS1P48059 325 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 PLCD1P51178 756 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 CDR1P51861 262 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 VAV2P52735 878 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 RPS8P62241 208 aaKnown RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 CXADRP78310 365 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 SRSF3P84103 164 aaKnown RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 CFHR3Q02985 330 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 LIPEQ05469 1076 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 WDR43Q15061 677 aaKnown RBP eCLIP3.87□□□□□ -1.79
SKP1-209ENST00000522552 PDK3Q15120 406 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 ELAVL1Q15717 326 aaKnown RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 KCNA10Q16322 511 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 ANKRD55Q3KP44 614 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 ZNF568Q3ZCX4 644 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 PDCD4Q53EL6 469 aaKnown RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 PRAMEF19Q5SWL8 479 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 ZNF618Q5T7W0 954 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 PRR27Q6MZM9 219 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 ZNF474Q6S9Z5 364 aaPredicted RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 CBLL1Q75N03 491 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 LINGO2Q7L985 606 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 BIVMQ86UB2 503 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 ZC3HC1Q86WB0 502 aaKnown RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 LAX1Q8IWV1 398 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 CERS5Q8N5B7 392 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 B3GALNT2Q8NCR0 500 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 OR52N4Q8NGI2 321 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 OR4A16Q8NH70 328 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 DNAJA4Q8WW22 397 aaPredicted RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 RLN3Q8WXF3 142 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 TMIGD2Q96BF3 282 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 MOB3AQ96BX8 217 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 C4orf36Q96KX1 117 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 BTBD9Q96Q07 612 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 RASL10BQ96S79 203 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 LZTS2Q9BRK4 669 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 C12orf65Q9H3J6 166 aaKnown RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 MAGIXQ9H6Y5 334 aa3.87□□□□□ -1.79
SKP1-209ENST00000522552 UPF2Q9HAU5 1272 aaKnown RBP3.87□□□□□ -1.79
SKP1-209ENST00000522552 UBAP1Q9NZ09 502 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms