RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 HPS6Q86YV9 775 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 KCT2Q8NC54 265 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 FAM13CQ8NE31 585 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 HM13Q8TCT9 377 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 ZNF641Q96N77 438 aaPredicted RBP15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 NPY6RQ99463 290 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 ERVK-6Q9BXR3 956 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 TRIM2Q9C040 744 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 H0YGN5 161 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 M0R2N6 131 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 CASKO14936 926 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 GRID2O43424 1007 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 AKAP8O43823 692 aaKnown RBP15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 COQ9O75208 318 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 CCNB2O95067 398 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 JMJD7P0C870 316 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 TCEA1P23193 301 aaKnown RBP15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 AHCYP23526 432 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 PTGIRP43119 386 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 GATMP50440 423 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 RIPK1Q13546 671 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 PLEKHG6Q3KR16 790 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 TRMT10BQ6PF06 316 aaKnown RBP15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 THAP5Q7Z6K1 395 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 RASGEF1AQ8N9B8 481 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 PSMA8Q8TAA3 256 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 CYP2S1Q96SQ9 504 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 TAC3Q9UHF0 121 aa15.91■□□□□ 0.14
PCDHA3-201ENST00000522353 OR51F1A6NGY5 319 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 NDUFS4O43181 175 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 SSNA1O43805 119 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 PRKAR1AP10644 381 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 IL1R2P27930 398 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 CCR10P46092 362 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 DNASE1L1P49184 302 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 SNTA1Q13424 505 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 PAFAH1B3Q15102 231 aaKnown RBP15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 ELOCQ15369 112 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 REP15Q6BDI9 236 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 RBM44Q6ZP01 1051 aaKnown RBP15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 ZNF781Q8N8C0 355 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 PYCR2Q96C36 320 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 GPATCH1Q9BRR8 931 aaKnown RBP15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 PDCD10Q9BUL8 212 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 PRAMEF11O60813 436 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 RBMXL2O75526 392 aaKnown RBP15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 ERVK-8P63133 956 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 DCUN1D3Q8IWE4 304 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 SLC35C2Q9NQQ7 365 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 ATXN10Q9UBB4 475 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 MAFFQ9ULX9 164 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 KCNK6Q9Y257 313 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 STYXL1Q9Y6J8 313 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 LAMTOR5O43504 91 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 IFNA6P05013 189 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 IMPDH1P20839 514 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 GALNT2Q10471 571 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 IRF5Q13568 498 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 QPCTQ16769 361 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 FRG2Q64ET8 278 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 SIAH1Q8IUQ4 282 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 GIPC3Q8TF64 312 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 NCSTNQ92542 709 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 FRG2BQ96QU4 278 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 KXD1Q9BQD3 176 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 SPHK2Q9NRA0 654 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 SDHAF3Q9NRP4 125 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 SALL4Q9UJQ4 1053 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 ELOA3DA6NLF2 546 aaPredicted RBP15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 SOCS5O75159 536 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 UPP1Q16831 310 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 ELOA3BQ3SY89 546 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 SLC9B1Q4ZJI4 515 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 FRRS1Q6ZNA5 592 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 P4HA3Q7Z4N8 544 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 ZNF280BQ86YH2 543 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 ELOA3Q8NG57 546 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 OR10A6Q8NH74 314 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 SPATA7Q9P0W8 599 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 DMTF1Q9Y222 760 aa15.9■□□□□ 0.14
PCDHA3-201ENST00000522353 A0A0G2JN53 185 aa15.89■□□□□ 0.14
PCDHA3-201ENST00000522353 BCKDKO14874 412 aa15.89■□□□□ 0.14
PCDHA3-201ENST00000522353 KLF8O95600 359 aaPredicted RBP15.89■□□□□ 0.14
PCDHA3-201ENST00000522353 HLA-EP13747 358 aa15.89■□□□□ 0.14
PCDHA3-201ENST00000522353 RING1Q06587 406 aa15.89■□□□□ 0.14
PCDHA3-201ENST00000522353 EIF4HQ15056 248 aaKnown RBP15.89■□□□□ 0.14
PCDHA3-201ENST00000522353 FBXO42Q6P3S6 717 aa15.89■□□□□ 0.14
PCDHA3-201ENST00000522353 SLC39A4Q6P5W5 647 aa15.89■□□□□ 0.14
PCDHA3-201ENST00000522353 ZZZ3Q8IYH5 903 aa15.89■□□□□ 0.14
PCDHA3-201ENST00000522353 LRRC17Q8N6Y2 441 aa15.89■□□□□ 0.14
PCDHA3-201ENST00000522353 OR52J3Q8NH60 311 aa15.89■□□□□ 0.14
PCDHA3-201ENST00000522353 ARHGAP9Q9BRR9 750 aa15.89■□□□□ 0.14
PCDHA3-201ENST00000522353 TMEM63AO94886 807 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 PRAMEF12O95522 483 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 CDH12P55289 794 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 SIM2Q14190 667 aaPredicted RBP15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 TMEM44Q2T9K0 475 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 NIPAL1Q6NVV3 410 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 OR2AJ1Q8NGZ0 328 aa15.89■□□□□ 0.13
PCDHA3-201ENST00000522353 KAT2AQ92830 837 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms