RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 LCE1AQ5T7P2 110 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 ZNF770Q6IQ21 691 aaPredicted RBP3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 FAM166AQ6J272 317 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 FAM171BQ6P995 826 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 SPATA21Q7Z572 469 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 NUDT13Q86X67 352 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 COMMD2Q86X83 199 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 KMT5CQ86Y97 462 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 TMCO5AQ8N6Q1 288 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 LILRB1Q8NHL6 650 aaPredicted RBP3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 P2RX5Q93086 422 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 MTERF3Q96E29 417 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 HMCESQ96FZ2 354 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 AK8Q96MA6 479 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 ZNF385AQ96PM9 386 aaKnown RBP3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 UTP14AQ9BVJ6 771 aaKnown RBP3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 LRRC4Q9HBW1 653 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 TRPC7Q9HCX4 862 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 ABCB8Q9NUT2 735 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 DNAJC17Q9NVM6 304 aaKnown RBP3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 SLCO1C1Q9NYB5 712 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 WNT16Q9UBV4 365 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 ARMCX3Q9UH62 379 aaPredicted RBP3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 CPSF3Q9UKF6 684 aaKnown RBP3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 ITGA11Q9UKX5 1188 aa3.22□□□□□ -1.89
HMGN1P28-201ENST00000521340 ZNF521Q96K83 1311 aa3.21□□□□□ -1.89
HMGN1P28-201ENST00000521340 A0A0A6YYC8 382 aaPredicted RBP3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 A0A0G2JPF8 293 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 MAGEA13PA6NCF6 341 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 HNRNPCL3B7ZW38 293 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 C19orf81C9J6K1 198 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 H3BNX3 289 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 I3L1I5 382 aaPredicted RBP3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 TULP2O00295 520 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 SLC33A1O00400 549 aaPredicted RBP3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 GAPDHSO14556 408 aaPredicted RBP3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 VEGFDO43915 354 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 MOCS3O95396 460 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 HNRNPCL4P0DMR1 293 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 SPP1P10451 314 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 FCGR1AP12314 374 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 CDH1P12830 882 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 GP1BBP13224 206 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 CD59P13987 128 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 ZNF23P17027 643 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 VCLP18206 1134 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 DUTP33316 252 aaKnown RBP3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 USP8P40818 1118 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 ST8SIA6P61647 398 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 PLA2G7Q13093 441 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 MFAP5Q13361 173 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 VEZF1Q14119 521 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 ITPRIPL2Q3MIP1 535 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 MCMDC2Q4G0Z9 681 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 AARDQ4LEZ3 155 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 ZNF789Q5FWF6 425 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 XKR3Q5GH77 459 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 TCTE1Q5JU00 501 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 CYP4A22Q5TCH4 519 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 CAPRIN2Q6IMN6 1127 aaKnown RBP3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 ZNF549Q6P9A3 640 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 PLEKHM3Q6ZWE6 761 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 ARMC9Q7Z3E5 817 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 ARHGAP22Q7Z5H3 698 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 CCDC91Q7Z6B0 441 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 CREBRFQ8IUR6 639 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 CHCHD4Q8N4Q1 142 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 C10orf53Q8N6V4 93 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 MAPKAPK5-AS1Q8N8E1 139 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 MGARPQ8TDB4 240 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 RNASE8Q8TDE3 154 aaKnown RBP3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 LRRC8CQ8TDW0 803 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 SORCS1Q8WY21 1168 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 HSD17B8Q92506 261 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 PIGBQ92521 554 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 TEKT1Q969V4 418 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 CDCA5Q96FF9 252 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 BICD1Q96G01 975 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 EPSTI1Q96J88 318 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 FAM20AQ96MK3 541 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 NEURL2Q9BR09 285 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 SF3B5Q9BWJ5 86 aaKnown RBP3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 ACPTQ9BZG2 426 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 A4GALTQ9NPC4 353 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 MRPL17Q9NRX2 175 aaKnown RBP3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 PHPT1Q9NRX4 125 aaPredicted RBP3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 APPL1Q9UKG1 709 aa3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 PA2G4Q9UQ80 394 aaKnown RBP3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 DHX29Q7Z478 1369 aaKnown RBP3.21□□□□□ -1.9
HMGN1P28-201ENST00000521340 WIZO95785 1651 aa3.2□□□□□ -1.9
HMGN1P28-201ENST00000521340 TRAV24A0A0B4J272 114 aa3.2□□□□□ -1.9
HMGN1P28-201ENST00000521340 A0A1W2PPI3 338 aa3.2□□□□□ -1.9
HMGN1P28-201ENST00000521340 A0A1W2PRV1 198 aa3.2□□□□□ -1.9
HMGN1P28-201ENST00000521340 MED19A0JLT2 244 aaPredicted RBP3.2□□□□□ -1.9
HMGN1P28-201ENST00000521340 SMIM30A4D0T7 59 aa3.2□□□□□ -1.9
HMGN1P28-201ENST00000521340 C15orf62A8K5M9 175 aa3.2□□□□□ -1.9
HMGN1P28-201ENST00000521340 FLRT2O43155 660 aa3.2□□□□□ -1.9
HMGN1P28-201ENST00000521340 PPIP5K2O43314 1243 aa3.2□□□□□ -1.9
HMGN1P28-201ENST00000521340 CTSVO60911 334 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms