RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, human

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-222	ENST00000520400	CCDC3	Q9BQI4	270 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	SLC2A11	Q9BYW1	496 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	LAT2	Q9GZY6	243 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	MMP28	Q9H239	520 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	PIH1D3	Q9NQM4	214 aa	Known RBP	4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	SH3GLB2	Q9NR46	395 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	RIPK3	Q9Y572	518 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	NME7	Q9Y5B8	376 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	PBRM1	Q86U86	1689 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	CEP170	Q5SW79	1584 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	SETBP1	Q9Y6X0	1596 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	FGD5	Q6ZNL6	1462 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	RAD54L2	Q9Y4B4	1467 aa		4.18	□□□□□ -1.74
CTNNA1-222	ENST00000520400	WDR97	A6NE52	1622 aa		4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	DNM1L	O00429	736 aa		4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	IPO8	O15397	1037 aa	Known RBP	4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	AP5Z1	O43299	807 aa		4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	UMOD	P07911	640 aa		4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	QDPR	P09417	244 aa		4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	PRKCI	P41743	596 aa		4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	NKX2-1	P43699	371 aa	Predicted RBP	4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	CRKL	P46109	303 aa	Known RBP	4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	ZNF75D	P51815	510 aa		4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	STPG1	Q5TH74	334 aa		4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	CAVIN1	Q6NZI2	390 aa	Known RBP	4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	IL17REL	Q6ZVW7	336 aa		4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	DNAJC22	Q8N4W6	341 aa		4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	LMNTD1	Q8N9Z9	388 aa		4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	OCC1	Q8TAD7	63 aa		4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	PIGB	Q92521	554 aa		4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	EXT2	Q93063	718 aa		4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	ZNF524	Q96C55	264 aa		4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	ZNF653	Q96CK0	615 aa		4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	FAM20A	Q96MK3	541 aa		4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	EDEM3	Q9BZQ6	932 aa		4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400		Q9H8V8	135 aa		4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	UPF2	Q9HAU5	1272 aa	Known RBP	4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	ZBTB20	Q9HC78	741 aa	Predicted RBP	4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	SDR39U1	Q9NRG7	319 aa	Predicted RBP	4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	ANAPC5	Q9UJX4	755 aa		4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	WDR83OS	Q9Y284	106 aa		4.17	□□□□□ -1.74
CTNNA1-222	ENST00000520400	WRN	Q14191	1432 aa	Predicted RBP eCLIP	4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	FAM86B1	E9PN63	330 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	PLOD2	O00469	737 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	CIDEA	O60543	219 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	SLC22A3	O75751	556 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	KRT36	O76013	467 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	DDHD2	O94830	711 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	NGF	P01138	241 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	ATP1A1	P05023	1023 aa	Known RBP	4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	CD48	P09326	243 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	FAM86B2	P0C5J1	330 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	TGFB3	P10600	412 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	PAX1	P15863	534 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	ERCC2	P18074	760 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	HOXC8	P31273	242 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	TLX1	P31314	330 aa	Predicted RBP	4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	GMPS	P49915	693 aa	Predicted RBP	4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	CLDN15	P56746	228 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	RPS18	P62269	152 aa	Known RBP	4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	GCNT1	Q02742	428 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	PRKCZ	Q05513	592 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	TFCP2	Q12800	502 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	TAF10	Q12962	218 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	MPP7	Q5T2T1	576 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	KRT39	Q6A163	491 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	GDPD4	Q6W3E5	623 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	MFSD6	Q6ZSS7	791 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	GALNTL5	Q7Z4T8	443 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	TLK2	Q86UE8	772 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	RTN4RL2	Q86UN3	420 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	MMD2	Q8IY49	270 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	MAML2	Q8IZL2	1156 aa	Predicted RBP	4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	ZNF383	Q8NA42	475 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	KBTBD8	Q8NFY9	601 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	VANGL1	Q8TAA9	524 aa	Predicted RBP	4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	SPATA33	Q96N06	139 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	PGLYRP2	Q96PD5	576 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	SEPHS2	Q99611	448 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	SHARPIN	Q9H0F6	387 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	KIF21B	O75037	1637 aa		4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	TARBP1	Q13395	1621 aa	Known RBP	4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	POLA1	P09884	1462 aa	Predicted RBP	4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	MAGI1	Q96QZ7	1491 aa	Predicted RBP	4.16	□□□□□ -1.74
CTNNA1-222	ENST00000520400	MYH15	Q9Y2K3	1946 aa		4.15	□□□□□ -1.74
CTNNA1-222	ENST00000520400	STRC	Q7RTU9	1775 aa		4.15	□□□□□ -1.74
CTNNA1-222	ENST00000520400	IGLV9-49	A0A0B4J1Y8	123 aa		4.15	□□□□□ -1.75
CTNNA1-222	ENST00000520400		A0A1W2PRQ8	180 aa		4.15	□□□□□ -1.75
CTNNA1-222	ENST00000520400	CCL24	O00175	119 aa		4.15	□□□□□ -1.75
CTNNA1-222	ENST00000520400	TOM1	O60784	492 aa		4.15	□□□□□ -1.75
CTNNA1-222	ENST00000520400	ZNF432	O94892	652 aa		4.15	□□□□□ -1.75
CTNNA1-222	ENST00000520400	IGHV4-38-2	P0DP08	117 aa		4.15	□□□□□ -1.75
CTNNA1-222	ENST00000520400	FDPS	P14324	419 aa	Known RBP	4.15	□□□□□ -1.75
CTNNA1-222	ENST00000520400	LIF	P15018	202 aa		4.15	□□□□□ -1.75
CTNNA1-222	ENST00000520400	GNAZ	P19086	355 aa		4.15	□□□□□ -1.75
CTNNA1-222	ENST00000520400	HSPA4	P34932	840 aa		4.15	□□□□□ -1.75
CTNNA1-222	ENST00000520400	NR2C2	P49116	596 aa		4.15	□□□□□ -1.75
CTNNA1-222	ENST00000520400	PTEN	P60484	403 aa		4.15	□□□□□ -1.75
CTNNA1-222	ENST00000520400	C1QTNF8	P60827	252 aa		4.15	□□□□□ -1.75
CTNNA1-222	ENST00000520400	VEZF1	Q14119	521 aa		4.15	□□□□□ -1.75

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