RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 RASGRP3Q8IV61 690 aa25.06■■□□□ 1.6
COL13A1-213ENST00000520267 HOMEZQ8IX15 550 aa25.06■■□□□ 1.6
COL13A1-213ENST00000520267 ASZ1Q8WWH4 475 aa25.06■■□□□ 1.6
COL13A1-213ENST00000520267 ADI1Q9BV57 179 aa25.06■■□□□ 1.6
COL13A1-213ENST00000520267 SLC6A13Q9NSD5 602 aa25.06■■□□□ 1.6
COL13A1-213ENST00000520267 H3BNH8 94 aa25.06■■□□□ 1.6
COL13A1-213ENST00000520267 FTH1P02794 183 aa25.06■■□□□ 1.6
COL13A1-213ENST00000520267 XPAP23025 273 aaPredicted RBP25.06■■□□□ 1.6
COL13A1-213ENST00000520267 NFKBIAP25963 317 aa25.06■■□□□ 1.6
COL13A1-213ENST00000520267 AP1S2P56377 157 aa25.06■■□□□ 1.6
COL13A1-213ENST00000520267 MERTKQ12866 999 aa25.06■■□□□ 1.6
COL13A1-213ENST00000520267 RUNDC3AQ59EK9 446 aa25.06■■□□□ 1.6
COL13A1-213ENST00000520267 RBM44Q6ZP01 1051 aaKnown RBP25.06■■□□□ 1.6
COL13A1-213ENST00000520267 DPPA4Q7L190 304 aa25.06■■□□□ 1.6
COL13A1-213ENST00000520267 TECPR1Q7Z6L1 1165 aa25.06■■□□□ 1.6
COL13A1-213ENST00000520267 TSPAN14Q8NG11 270 aa25.06■■□□□ 1.6
COL13A1-213ENST00000520267 OR2T12Q8NG77 320 aa25.06■■□□□ 1.6
COL13A1-213ENST00000520267 ZSCAN5AQ9BUG6 496 aa25.06■■□□□ 1.6
COL13A1-213ENST00000520267 FBXO10Q9UK96 956 aa25.06■■□□□ 1.6
COL13A1-213ENST00000520267 C16orf96A6NNT2 1141 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 SOBPA7XYQ1 873 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 XYLBO75191 536 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 SLCO2B1O94956 709 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 CISD3P0C7P0 127 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 TACR1P25103 407 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 HOXA9P31269 272 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 CLDN8P56748 225 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 ABRQ12979 859 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 CAMK1Q14012 370 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 TCEAL5Q5H9L2 206 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 RNF175Q8N4F7 328 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 ZNF548Q8NEK5 533 aaPredicted RBP25.05■■□□□ 1.6
COL13A1-213ENST00000520267 ITFG1Q8TB96 612 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 OSCP1Q8WVF1 389 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 BTN2A2Q8WVV5 523 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 FIG4Q92562 907 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 APIPQ96GX9 242 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 VPS50Q96JG6 964 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 HALP42357 657 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 CTSCP53634 463 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 PPIGQ13427 754 aaKnown RBP eCLIP25.05■■□□□ 1.6
COL13A1-213ENST00000520267 RAVER1Q8IY67 606 aaKnown RBP25.05■■□□□ 1.6
COL13A1-213ENST00000520267 RASGEF1AQ8N9B8 481 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 LEMD2Q8NC56 503 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 ARMC5Q96C12 935 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 TIFAQ96CG3 184 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 CMTM7Q96FZ5 175 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 CCDC115Q96NT0 180 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 TSSK3Q96PN8 268 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 NFKBIL1Q9UBC1 381 aaPredicted RBP25.05■■□□□ 1.6
COL13A1-213ENST00000520267 SLC8A2Q9UPR5 921 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 ITM2BQ9Y287 266 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 MYRFQ9Y2G1 1151 aa25.05■■□□□ 1.6
COL13A1-213ENST00000520267 VILLO15195 856 aa25.04■■□□□ 1.6
COL13A1-213ENST00000520267 TSPAN6O43657 245 aa25.04■■□□□ 1.6
COL13A1-213ENST00000520267 TCF3P15923 654 aa25.04■■□□□ 1.6
COL13A1-213ENST00000520267 DGKGP49619 791 aa25.04■■□□□ 1.6
COL13A1-213ENST00000520267 CHIT1Q13231 466 aa25.04■■□□□ 1.6
COL13A1-213ENST00000520267 ZNF284Q2VY69 593 aa25.04■■□□□ 1.6
COL13A1-213ENST00000520267 SLC36A3Q495N2 470 aa25.04■■□□□ 1.6
COL13A1-213ENST00000520267 TMEM240Q5SV17 173 aa25.04■■□□□ 1.6
COL13A1-213ENST00000520267 C12orf40Q86WS4 652 aa25.04■■□□□ 1.6
COL13A1-213ENST00000520267 FOXJ1Q92949 421 aa25.04■■□□□ 1.6
COL13A1-213ENST00000520267 FBXL8Q96CD0 374 aa25.04■■□□□ 1.6
COL13A1-213ENST00000520267 DGCR14Q96DF8 476 aaKnown RBP25.04■■□□□ 1.6
COL13A1-213ENST00000520267 PAIP1Q9H074 479 aaKnown RBP25.04■■□□□ 1.6
COL13A1-213ENST00000520267 TRBV5-3A0A0A0MS03 114 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 PER2O15055 1255 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 CYP17A1P05093 508 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 HNRNPA1P09651 372 aaKnown RBP eCLIP25.03■■□□□ 1.6
COL13A1-213ENST00000520267 PRPS2P11908 318 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 SDC1P18827 310 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 PRPH2P23942 346 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 EEF1AKMT2Q5JPI9 291 aaKnown RBP25.03■■□□□ 1.6
COL13A1-213ENST00000520267 TBPL2Q6SJ96 375 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 LILRA3Q8N6C8 439 aaPredicted RBP25.03■■□□□ 1.6
COL13A1-213ENST00000520267 RMND5BQ96G75 393 aaPredicted RBP25.03■■□□□ 1.6
COL13A1-213ENST00000520267 CARS2Q9HA77 564 aaKnown RBP25.03■■□□□ 1.6
COL13A1-213ENST00000520267 PPT2Q9UMR5 302 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 ARHGEF33A8MVX0 844 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 GSTA4O15217 222 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 TULP3O75386 442 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 GSTM1P09488 218 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 RPL10P27635 214 aaKnown RBP25.03■■□□□ 1.6
COL13A1-213ENST00000520267 MMP12P39900 470 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 NR1H2P55055 460 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 GSTM4Q03013 218 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 GRIN2CQ14957 1233 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 LIPIQ6XZB0 460 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 CYP2U1Q7Z449 544 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 PHACTR4Q8IZ21 702 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 AADATQ8N5Z0 425 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 FAM86B1Q8N7N1 296 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 TBCDQ9BTW9 1192 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 TRIM4Q9C037 500 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 GORASP2Q9H8Y8 452 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 NTN4Q9HB63 628 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 SERHLQ9NQF3 203 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 C8orf4Q9NR00 106 aa25.03■■□□□ 1.6
COL13A1-213ENST00000520267 RAD18Q9NS91 495 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms