RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 HMGCLL1Q8TB92 370 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 JPH3Q8WXH2 748 aaPredicted RBP17.26■□□□□ 0.35
SDC2-205ENST00000520233 CCDC74AQ96AQ1 378 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 IL17FQ96PD4 163 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 FAM111AQ96PZ2 611 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 CDC6Q99741 560 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 TBC1D10AQ9BXI6 508 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 SRMSQ9H3Y6 488 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 XKR8Q9H6D3 395 aa17.26■□□□□ 0.35
SDC2-205ENST00000520233 TMEM120BA0PK00 339 aa17.25■□□□□ 0.35
SDC2-205ENST00000520233 G3V2L1 256 aa17.25■□□□□ 0.35
SDC2-205ENST00000520233 ZW10O43264 779 aa17.25■□□□□ 0.35
SDC2-205ENST00000520233 GFAPP14136 432 aa17.25■□□□□ 0.35
SDC2-205ENST00000520233 ATP5F1P24539 256 aaPredicted RBP17.25■□□□□ 0.35
SDC2-205ENST00000520233 ACP1P24666 158 aa17.25■□□□□ 0.35
SDC2-205ENST00000520233 ETV4P43268 484 aa17.25■□□□□ 0.35
SDC2-205ENST00000520233 PNLIPRP1P54315 467 aa17.25■□□□□ 0.35
SDC2-205ENST00000520233 ALDH18A1P54886 795 aaKnown RBP17.25■□□□□ 0.35
SDC2-205ENST00000520233 AGTRAPQ6RW13 159 aa17.25■□□□□ 0.35
SDC2-205ENST00000520233 ZYG11AQ6WRX3 759 aa17.25■□□□□ 0.35
SDC2-205ENST00000520233 LRRC56Q8IYG6 542 aaPredicted RBP17.25■□□□□ 0.35
SDC2-205ENST00000520233 FBXO39Q8N4B4 442 aa17.25■□□□□ 0.35
SDC2-205ENST00000520233 NETO1Q8TDF5 533 aa17.25■□□□□ 0.35
SDC2-205ENST00000520233 NRTNQ99748 197 aa17.25■□□□□ 0.35
SDC2-205ENST00000520233 TWSG1Q9GZX9 223 aa17.25■□□□□ 0.35
SDC2-205ENST00000520233 KCNK4Q9NYG8 393 aa17.25■□□□□ 0.35
SDC2-205ENST00000520233 OR6C2Q9NZP2 312 aa17.25■□□□□ 0.35
SDC2-205ENST00000520233 PTBP2Q9UKA9 531 aaKnown RBP17.25■□□□□ 0.35
SDC2-205ENST00000520233 E7ENX8 843 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 TAPBPO15533 448 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 DLX3O60479 287 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 UBXN7O94888 489 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 MYL2P10916 166 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 CPA3P15088 417 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 ALDH4A1P30038 563 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 HPDP32754 393 aaPredicted RBP17.24■□□□□ 0.35
SDC2-205ENST00000520233 GGT5P36269 586 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 GPLD1P80108 840 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 NFKB2Q00653 900 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 TAP2Q03519 686 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 SETDB1Q15047 1291 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 PFKFB4Q16877 469 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 PERM1Q5SV97 790 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 KLHL35Q6PF15 583 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 EFL1Q7Z2Z2 1120 aaKnown RBP17.24■□□□□ 0.35
SDC2-205ENST00000520233 SLC22A9Q8IVM8 553 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 SYTL1Q8IYJ3 562 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 KIAA2013Q8IYS2 634 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 LINC01555Q8NAE3 123 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 IFI44Q8TCB0 444 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 SMPDL3AQ92484 453 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 CCDC126Q96EE4 140 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 SELENOSQ9BQE4 189 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 EPB41L1Q9H4G0 881 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 WWOXQ9NZC7 414 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 COPG2Q9UBF2 871 aa17.24■□□□□ 0.35
SDC2-205ENST00000520233 CABIN1Q9Y6J0 2220 aa17.23■□□□□ 0.35
SDC2-205ENST00000520233 OR6C74A6NCV1 312 aa17.23■□□□□ 0.35
SDC2-205ENST00000520233 A8MT66 165 aa17.23■□□□□ 0.35
SDC2-205ENST00000520233 STX16-NPEPL1H3BU86 382 aa17.23■□□□□ 0.35
SDC2-205ENST00000520233 BTN3A3O00478 584 aa17.23■□□□□ 0.35
SDC2-205ENST00000520233 STX16O14662 325 aa17.23■□□□□ 0.35
SDC2-205ENST00000520233 B4GAT1O43505 415 aa17.23■□□□□ 0.35
SDC2-205ENST00000520233 TNFSF14O43557 240 aa17.23■□□□□ 0.35
SDC2-205ENST00000520233 IPO13O94829 963 aaKnown RBP17.23■□□□□ 0.35
SDC2-205ENST00000520233 AMD1P17707 334 aa17.23■□□□□ 0.35
SDC2-205ENST00000520233 OR1D5P58170 312 aa17.23■□□□□ 0.35
SDC2-205ENST00000520233 PPP2R2AP63151 447 aa17.23■□□□□ 0.35
SDC2-205ENST00000520233 FASTKQ14296 549 aaKnown RBP17.23■□□□□ 0.35
SDC2-205ENST00000520233 ZXDCQ2QGD7 858 aaPredicted RBP17.23■□□□□ 0.35
SDC2-205ENST00000520233 SPRED1Q7Z699 444 aa17.23■□□□□ 0.35
SDC2-205ENST00000520233 OOSP2Q86WS3 158 aa17.23■□□□□ 0.35
SDC2-205ENST00000520233 KLHDC8AQ8IYD2 350 aa17.23■□□□□ 0.35
SDC2-205ENST00000520233 ADGRF3Q8IZF5 1079 aa17.23■□□□□ 0.35
SDC2-205ENST00000520233 PTGR2Q8N8N7 351 aaPredicted RBP17.23■□□□□ 0.35
SDC2-205ENST00000520233 ANKRD42Q8N9B4 389 aa17.23■□□□□ 0.35
SDC2-205ENST00000520233 OR56A3Q8NH54 315 aa17.23■□□□□ 0.35
SDC2-205ENST00000520233 OR10G6Q8NH81 332 aa17.23■□□□□ 0.35
SDC2-205ENST00000520233 UBTD2Q8WUN7 234 aa17.23■□□□□ 0.35
SDC2-205ENST00000520233 CCDC3Q9BQI4 270 aa17.23■□□□□ 0.35
SDC2-205ENST00000520233 TMEM79Q9BSE2 394 aa17.23■□□□□ 0.35
SDC2-205ENST00000520233 ATG10Q9H0Y0 220 aa17.23■□□□□ 0.35
SDC2-205ENST00000520233 CNOT10Q9H9A5 744 aaKnown RBP17.23■□□□□ 0.35
SDC2-205ENST00000520233 NKIRAS1Q9NYS0 192 aa17.23■□□□□ 0.35
SDC2-205ENST00000520233 OGFRQ9NZT2 677 aa17.23■□□□□ 0.35
SDC2-205ENST00000520233 TNPO3Q9Y5L0 923 aaKnown RBP17.23■□□□□ 0.35
SDC2-205ENST00000520233 ENTPD2Q9Y5L3 495 aa17.23■□□□□ 0.35
SDC2-205ENST00000520233 IGHV1OR21-1A0A087WYE8 117 aa17.22■□□□□ 0.35
SDC2-205ENST00000520233 OR5K3A6NET4 321 aa17.22■□□□□ 0.35
SDC2-205ENST00000520233 H3BQF6 201 aa17.22■□□□□ 0.35
SDC2-205ENST00000520233 PROS1P07225 676 aa17.22■□□□□ 0.35
SDC2-205ENST00000520233 GP1BAP07359 652 aa17.22■□□□□ 0.35
SDC2-205ENST00000520233 CHRM5P08912 532 aaPredicted RBP17.22■□□□□ 0.35
SDC2-205ENST00000520233 DHRS4L1P0CG22 281 aa17.22■□□□□ 0.35
SDC2-205ENST00000520233 CCND1P24385 295 aa17.22■□□□□ 0.35
SDC2-205ENST00000520233 SLC6A12P48065 614 aa17.22■□□□□ 0.35
SDC2-205ENST00000520233 NAE1Q13564 534 aa17.22■□□□□ 0.35
SDC2-205ENST00000520233 PCLAFQ15004 111 aa17.22■□□□□ 0.35
SDC2-205ENST00000520233 PCBP2Q15366 365 aaKnown RBP eCLIP17.22■□□□□ 0.357e-17■■■□□ 17.7
SDC2-205ENST00000520233 C18orf21Q32NC0 220 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms