RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 FOXO6A8MYZ6 492 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 OVOL3O00110 214 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 MDM4O15151 490 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 CAVIN2O95810 425 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 LCKP06239 509 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 PNMA6AP0CW24 399 aaPredicted RBP6.99□□□□□ -1.29
SDCBP-208ENST00000520228 IRF1P10914 325 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 KRT9P35527 623 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 GPD2P43304 727 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 ACADSBP45954 432 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 MTNR1AP48039 350 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 KLK7P49862 253 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 POLR2FP61218 127 aaKnown RBP6.99□□□□□ -1.29
SDCBP-208ENST00000520228 VAMP2P63027 116 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 TPM4P67936 248 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.99□□□□□ -1.29
SDCBP-208ENST00000520228 GOLGA8FQ08AF8 430 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 GOLGA8DPQ0D2H9 430 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 BYSLQ13895 437 aaKnown RBP6.99□□□□□ -1.29
SDCBP-208ENST00000520228 GALNT3Q14435 633 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 SYCP1Q15431 976 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 MEA1Q16626 185 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 ZSCAN23Q3MJ62 389 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 FILIP1LQ4L180 1135 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 SH2D4BQ5SQS7 431 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 BSPRYQ5W0U4 402 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 SLC47A2Q86VL8 602 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 ANKRD13BQ86YJ7 626 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 SCML4Q8N228 414 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 PRSS3P2Q8NHM4 247 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 C16orf52Q8NHV5 167 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 RNF139Q8WU17 664 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 IRGQQ8WZA9 623 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 NDRG1Q92597 394 aaKnown RBP6.99□□□□□ -1.29
SDCBP-208ENST00000520228 EXOC4Q96A65 974 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 MIS12Q9H081 205 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 ECT2Q9H8V3 914 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 TBC1D14Q9P2M4 693 aa6.99□□□□□ -1.29
SDCBP-208ENST00000520228 DENND4AQ7Z401 1863 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 DPPA5A6NC42 116 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 YJEFN3A6XGL0 299 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 ZNF814B7Z6K7 855 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 E7ENQ6 273 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 F8VZ95 297 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 RHODO00212 210 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 FCGR2AP12318 317 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 CYP11B1P15538 503 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 HNF1BP35680 557 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 MAGEA9P43362 315 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 RPS9P46781 194 aaKnown RBP6.98□□□□□ -1.29
SDCBP-208ENST00000520228 SNX16P57768 344 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 DAOAP59103 153 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 COG7P83436 770 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 GRSF1Q12849 480 aaKnown RBP eCLIP6.98□□□□□ -1.29
SDCBP-208ENST00000520228 KLF9Q13886 244 aaPredicted RBP6.98□□□□□ -1.29
SDCBP-208ENST00000520228 PON2Q15165 354 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 PIK3CD-AS1Q5SR53 167 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 ZNF793Q6ZN11 406 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 BHLHA9Q7RTU4 235 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 APTXQ7Z2E3 356 aaKnown RBP6.98□□□□□ -1.29
SDCBP-208ENST00000520228 TMEM110Q86TL2 294 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 LUZP1Q86V48 1076 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 BBS7Q8IWZ6 715 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 CCDC105Q8IYK2 499 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 LSM14AQ8ND56 463 aaKnown RBP6.98□□□□□ -1.29
SDCBP-208ENST00000520228 NEK11Q8NG66 645 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 NCSTNQ92542 709 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 EME1Q96AY2 570 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 CLDN23Q96B33 292 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 OTUB2Q96DC9 234 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 FRG2BQ96QU4 278 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 SPAG5Q96R06 1193 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 ERGIC2Q96RQ1 377 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 WDR83Q9BRX9 315 aaKnown RBP6.98□□□□□ -1.29
SDCBP-208ENST00000520228 CADM1Q9BY67 442 aaKnown RBP6.98□□□□□ -1.29
SDCBP-208ENST00000520228 GANQ9H2C0 597 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 LHX5Q9H2C1 402 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 PDCL3Q9H2J4 239 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 LMAN1LQ9HAT1 526 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 THSD1Q9NS62 852 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 ABCC13Q9NSE7 274 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 OLA1Q9NTK5 396 aaKnown RBP6.98□□□□□ -1.29
SDCBP-208ENST00000520228 TUBA8Q9NY65 449 aaPredicted RBP6.98□□□□□ -1.29
SDCBP-208ENST00000520228 DLGAP2Q9P1A6 1054 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 CYTH4Q9UIA0 394 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 RASAL2Q9UJF2 1139 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 LSM7Q9UK45 103 aaKnown RBP6.98□□□□□ -1.29
SDCBP-208ENST00000520228 C2orf16Q68DN1 1984 aa6.98□□□□□ -1.29
SDCBP-208ENST00000520228 MTCL1Q9Y4B5 1905 aaKnown RBP6.97□□□□□ -1.29
SDCBP-208ENST00000520228 WDR91A4D1P6 747 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 TMEM247A6NEH6 219 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 GOLGA6L19H0YKK7 550 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 PEX12O00623 359 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 TRDMT1O14717 391 aaKnown RBP6.97□□□□□ -1.29
SDCBP-208ENST00000520228 EPHB6O15197 1021 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 ATG13O75143 517 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 GFPT2O94808 682 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 SERPINC1P01008 464 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 HMBSP08397 361 aa6.97□□□□□ -1.29
SDCBP-208ENST00000520228 CHRNB1P11230 501 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms