RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 CFAP61Q8NHU2 1237 aa11.97□□□□□ -0.49
CSMD1-205ENST00000519623 PROKR1Q8TCW9 393 aa11.97□□□□□ -0.49
CSMD1-205ENST00000519623 IP6K3Q96PC2 410 aa11.97□□□□□ -0.49
CSMD1-205ENST00000519623 SMAD5Q99717 465 aaKnown RBP11.97□□□□□ -0.49
CSMD1-205ENST00000519623 C17orf62Q9BQA9 187 aa11.97□□□□□ -0.49
CSMD1-205ENST00000519623 TSGA10Q9BZW7 698 aa11.97□□□□□ -0.49
CSMD1-205ENST00000519623 P2RY12Q9H244 342 aa11.97□□□□□ -0.49
CSMD1-205ENST00000519623 SLC22A11Q9NSA0 550 aa11.97□□□□□ -0.49
CSMD1-205ENST00000519623 TREX1Q9NSU2 369 aa11.97□□□□□ -0.49
CSMD1-205ENST00000519623 EURLQ9NYK6 297 aa11.97□□□□□ -0.49
CSMD1-205ENST00000519623 CIDEBQ9UHD4 219 aa11.97□□□□□ -0.49
CSMD1-205ENST00000519623 PADI2Q9Y2J8 665 aa11.97□□□□□ -0.49
CSMD1-205ENST00000519623 DPM1O60762 260 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 VPS4BO75351 444 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 ONECUT2O95948 504 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 APOA4P06727 396 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 CD63P08962 238 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 GP1BBP13224 206 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 ITGAXP20702 1163 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 GNLYP22749 145 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 NMBRP28336 390 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 NPY2RP49146 381 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 TTPAP49638 278 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 SESN2P58004 480 aaPredicted RBP11.96□□□□□ -0.49
CSMD1-205ENST00000519623 FOXL2P58012 376 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 CRADDP78560 199 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 AARS2Q5JTZ9 985 aaKnown RBP11.96□□□□□ -0.49
CSMD1-205ENST00000519623 FCRL6Q6DN72 434 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 UNC5DQ6UXZ4 953 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 MRGPREQ86SM8 312 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 HPS6Q86YV9 775 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 EFCAB3Q8N7B9 438 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 PPHLN1Q8NEY8 458 aaKnown RBP11.96□□□□□ -0.49
CSMD1-205ENST00000519623 OR2Y1Q8NGV0 311 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 OR2L8Q8NGY9 312 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 PTERQ96BW5 349 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 IL17FQ96PD4 163 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 TSSK1BQ9BXA7 367 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 MFRPQ9BY79 579 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 EIF2B3Q9NR50 452 aaKnown RBP11.96□□□□□ -0.49
CSMD1-205ENST00000519623 ENAMQ9NRM1 1142 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 CATSPERZQ9NTU4 200 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 GPR83Q9NYM4 423 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 IFT80Q9P2H3 777 aaPredicted RBP11.96□□□□□ -0.49
CSMD1-205ENST00000519623 GPN3Q9UHW5 284 aaPredicted RBP11.96□□□□□ -0.49
CSMD1-205ENST00000519623 ANAPC5Q9UJX4 755 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 VPS4AQ9UN37 437 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 SRPK3Q9UPE1 567 aa11.96□□□□□ -0.49
CSMD1-205ENST00000519623 PTRH2Q9Y3E5 179 aaKnown RBP11.96□□□□□ -0.49
CSMD1-205ENST00000519623 PCM1Q15154 2024 aa11.96□□□□□ -0.5
CSMD1-205ENST00000519623 DOCK10Q96BY6 2186 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 HIVEP3Q5T1R4 2406 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 RPN2P04844 631 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 UMODP07911 640 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 ATXN8OSP0DMR3 200 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 RPS3P23396 243 aaKnown RBP eCLIP11.95□□□□□ -0.5
CSMD1-205ENST00000519623 ARNTP27540 789 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 FOLR3P41439 243 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 GRIA3P42263 894 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 KCNJ1P48048 391 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 SOX8P57073 446 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 RAPSNQ13702 412 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 SLC9A5Q14940 896 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 INPP5JQ15735 1006 aaPredicted RBP11.95□□□□□ -0.5
CSMD1-205ENST00000519623 PRR30Q53SZ7 412 aaPredicted RBP11.95□□□□□ -0.5
CSMD1-205ENST00000519623 DCAF10Q5QP82 559 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 SLC6A19Q695T7 634 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 FIGLAQ6QHK4 219 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 C4orf22Q6V702 233 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 PPP1R32Q7Z5V6 425 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 DCUN1D3Q8IWE4 304 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 SLC22A18Q96BI1 424 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 ZNF285Q96NJ3 590 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 NDC1Q9BTX1 674 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 IL22Q9GZX6 179 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 TXLNGQ9NUQ3 528 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 P4HTMQ9NXG6 502 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 BFARQ9NZS9 450 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 C5AR2Q9P296 337 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 CNTRLQ7Z7A1 2325 aa11.95□□□□□ -0.5
CSMD1-205ENST00000519623 MDC1Q14676 2089 aaKnown RBP11.95□□□□□ -0.5
CSMD1-205ENST00000519623 BLACEA4D250 179 aa11.94□□□□□ -0.5
CSMD1-205ENST00000519623 MASP2O00187 686 aa11.94□□□□□ -0.5
CSMD1-205ENST00000519623 RASGRF2O14827 1237 aa11.94□□□□□ -0.5
CSMD1-205ENST00000519623 C1orf105O95561 183 aa11.94□□□□□ -0.5
CSMD1-205ENST00000519623 S1PR4O95977 384 aa11.94□□□□□ -0.5
CSMD1-205ENST00000519623 ALAS2P22557 587 aa11.94□□□□□ -0.5
CSMD1-205ENST00000519623 SF1Q15637 639 aaKnown RBP11.94□□□□□ -0.5
CSMD1-205ENST00000519623 KCTD19Q17RG1 926 aaPredicted RBP11.94□□□□□ -0.5
CSMD1-205ENST00000519623 PLEKHN1Q494U1 663 aaPredicted RBP11.94□□□□□ -0.5
CSMD1-205ENST00000519623 CCSMST1Q4G0I0 132 aa11.94□□□□□ -0.5
CSMD1-205ENST00000519623 VWA5B1Q5TIE3 1220 aa11.94□□□□□ -0.5
CSMD1-205ENST00000519623 PTRHD1Q6GMV3 140 aaKnown RBP11.94□□□□□ -0.5
CSMD1-205ENST00000519623 ZNF662Q6ZS27 426 aa11.94□□□□□ -0.5
CSMD1-205ENST00000519623 TTLL10Q6ZVT0 673 aa11.94□□□□□ -0.5
CSMD1-205ENST00000519623 OVCH1Q7RTY7 1134 aa11.94□□□□□ -0.5
CSMD1-205ENST00000519623 TAX1BP1Q86VP1 789 aa11.94□□□□□ -0.5
CSMD1-205ENST00000519623 LRRC6Q86X45 466 aa11.94□□□□□ -0.5
CSMD1-205ENST00000519623 MPP5Q8N3R9 675 aa11.94□□□□□ -0.5
CSMD1-205ENST00000519623 GALNT16Q8N428 558 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms