RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	C1QL1	O75973	258 aa		23.32	■■□□□ 1.32
CNOT7-204	ENST00000518885	OR2B3	O76000	313 aa		23.32	■■□□□ 1.32
CNOT7-204	ENST00000518885	CAT	P04040	527 aa	Known RBP	23.32	■■□□□ 1.32
CNOT7-204	ENST00000518885	ENO3	P13929	434 aa	Predicted RBP	23.32	■■□□□ 1.32
CNOT7-204	ENST00000518885	PTPN4	P29074	926 aa		23.32	■■□□□ 1.32
CNOT7-204	ENST00000518885	HSD17B2	P37059	387 aa		23.32	■■□□□ 1.32
CNOT7-204	ENST00000518885	SLC1A2	P43004	574 aa		23.32	■■□□□ 1.32
CNOT7-204	ENST00000518885	POLE2	P56282	527 aa		23.32	■■□□□ 1.32
CNOT7-204	ENST00000518885	SF1	Q15637	639 aa	Known RBP	23.32	■■□□□ 1.32
CNOT7-204	ENST00000518885	NEK10	Q6ZWH5	1172 aa		23.32	■■□□□ 1.32
CNOT7-204	ENST00000518885	SYVN1	Q86TM6	617 aa		23.32	■■□□□ 1.32
CNOT7-204	ENST00000518885	TRIM73	Q86UV7	250 aa		23.32	■■□□□ 1.32
CNOT7-204	ENST00000518885	KCNMB4	Q86W47	210 aa		23.32	■■□□□ 1.32
CNOT7-204	ENST00000518885	RNF31	Q96EP0	1072 aa		23.32	■■□□□ 1.32
CNOT7-204	ENST00000518885	NRTN	Q99748	197 aa		23.32	■■□□□ 1.32
CNOT7-204	ENST00000518885	EBNA1BP2	Q99848	306 aa	Known RBP	23.32	■■□□□ 1.32
CNOT7-204	ENST00000518885	TRIM56	Q9BRZ2	755 aa	Known RBP	23.32	■■□□□ 1.32
CNOT7-204	ENST00000518885	ACTL8	Q9H568	366 aa		23.32	■■□□□ 1.32
CNOT7-204	ENST00000518885	FBXO6	Q9NRD1	293 aa	Predicted RBP	23.32	■■□□□ 1.32
CNOT7-204	ENST00000518885	SRPK3	Q9UPE1	567 aa		23.32	■■□□□ 1.32
CNOT7-204	ENST00000518885	PLCL2	Q9UPR0	1127 aa		23.32	■■□□□ 1.32
CNOT7-204	ENST00000518885	MATN4	O95460	622 aa		23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885	CD63	P08962	238 aa		23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885	RAB40AL	P0C0E4	278 aa		23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885	F8A1	P23610	371 aa		23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885	PTGIR	P43119	386 aa		23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885	KCNAB2	Q13303	367 aa		23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885	CTBP1	Q13363	440 aa		23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885	GBX1	Q14549	363 aa		23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885	CRYM	Q14894	314 aa		23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885	DEFB109B	Q30KR1	87 aa		23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885	HSP90AA5P	Q58FG0	334 aa		23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885	ZC3H12B	Q5HYM0	836 aa	Known RBP	23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885	LRRC8E	Q6NSJ5	796 aa		23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885	UGT3A1	Q6NUS8	523 aa		23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885	TLDC1	Q6P9B6	456 aa		23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885	DENND6A	Q8IWF6	608 aa		23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885	DSEL	Q8IZU8	1212 aa		23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885	EXD3	Q8N9H8	876 aa		23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885	FLVCR1-AS1	Q8TAF5	88 aa		23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885	HMGCLL1	Q8TB92	370 aa		23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885	LRRC39	Q96DD0	335 aa		23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885	IL1RAPL1	Q9NZN1	696 aa		23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885	FBXO5	Q9UKT4	447 aa		23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885	FARSA	Q9Y285	508 aa	Known RBP	23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885	HEMK1	Q9Y5R4	338 aa	Predicted RBP	23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885	MRPS18B	Q9Y676	258 aa	Known RBP	23.31	■■□□□ 1.32
CNOT7-204	ENST00000518885		C9J4A7	227 aa		23.3	■■□□□ 1.32
CNOT7-204	ENST00000518885	VPS26A	O75436	327 aa		23.3	■■□□□ 1.32
CNOT7-204	ENST00000518885	CBSL	P0DN79	551 aa		23.3	■■□□□ 1.32
CNOT7-204	ENST00000518885	OAS2	P29728	719 aa	Known RBP	23.3	■■□□□ 1.32
CNOT7-204	ENST00000518885	CBS	P35520	551 aa		23.3	■■□□□ 1.32
CNOT7-204	ENST00000518885	DHX9	Q08211	1270 aa	Known RBP	23.3	■■□□□ 1.32
CNOT7-204	ENST00000518885	GPS2	Q13227	327 aa		23.3	■■□□□ 1.32
CNOT7-204	ENST00000518885	ERV3-1	Q14264	604 aa		23.3	■■□□□ 1.32
CNOT7-204	ENST00000518885	GRB7	Q14451	532 aa		23.3	■■□□□ 1.32
CNOT7-204	ENST00000518885	ZNF517	Q6ZMY9	492 aa	Predicted RBP	23.3	■■□□□ 1.32
CNOT7-204	ENST00000518885	LINC01555	Q8NAE3	123 aa		23.3	■■□□□ 1.32
CNOT7-204	ENST00000518885	THAP4	Q8WY91	577 aa		23.3	■■□□□ 1.32
CNOT7-204	ENST00000518885	FAM136A	Q96C01	138 aa		23.3	■■□□□ 1.32
CNOT7-204	ENST00000518885	SNF8	Q96H20	258 aa		23.3	■■□□□ 1.32
CNOT7-204	ENST00000518885	MENT	Q9BUN1	341 aa		23.3	■■□□□ 1.32
CNOT7-204	ENST00000518885	PADI2	Q9Y2J8	665 aa		23.3	■■□□□ 1.32
CNOT7-204	ENST00000518885	NFS1	Q9Y697	457 aa		23.3	■■□□□ 1.32
CNOT7-204	ENST00000518885	PIEZO2	Q9H5I5	2752 aa		23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885		B8ZZF3	427 aa		23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885	EIF3F	O00303	357 aa	Predicted RBP	23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885	ZNF749	O43361	778 aa		23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885	BDKRB1	P46663	353 aa		23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885	CLCN7	P51798	805 aa		23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885	ARL4C	P56559	192 aa		23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885	ARHGAP19	Q14CB8	494 aa		23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885	KLHL38	Q2WGJ6	581 aa		23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885	BBS9	Q3SYG4	887 aa		23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885	FAM199X	Q6PEV8	388 aa	Predicted RBP	23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885	KIAA0408	Q6ZU52	694 aa		23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885	SYTL1	Q8IYJ3	562 aa		23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885	BBOF1	Q8ND07	529 aa		23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885	PROKR1	Q8TCW9	393 aa		23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885	DLG3	Q92796	817 aa		23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885	INPP5D	Q92835	1189 aa		23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885	ZUFSP	Q96AP4	578 aa		23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885	IL17F	Q96PD4	163 aa		23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885	NDC1	Q9BTX1	674 aa		23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885	NLN	Q9BYT8	704 aa		23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885	SEMA4C	Q9C0C4	833 aa		23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885	SLC25A18	Q9H1K4	315 aa		23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885	IARS2	Q9NSE4	1012 aa	Known RBP	23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885	TXLNG	Q9NUQ3	528 aa		23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885	PCMTD2	Q9NV79	361 aa		23.29	■■□□□ 1.32
CNOT7-204	ENST00000518885	CDC14C	A4D256	554 aa		23.28	■■□□□ 1.32
CNOT7-204	ENST00000518885	TARM1	B6A8C7	271 aa		23.28	■■□□□ 1.32
CNOT7-204	ENST00000518885	ZSCAN9	O15535	394 aa	Predicted RBP	23.28	■■□□□ 1.32
CNOT7-204	ENST00000518885	MAG	P20916	626 aa		23.28	■■□□□ 1.32
CNOT7-204	ENST00000518885	PEBP1	P30086	187 aa	Known RBP	23.28	■■□□□ 1.32
CNOT7-204	ENST00000518885	RORA	P35398	523 aa		23.28	■■□□□ 1.32
CNOT7-204	ENST00000518885	SKIV2L2	P42285	1042 aa	Known RBP	23.28	■■□□□ 1.32
CNOT7-204	ENST00000518885	HIF1A	Q16665	826 aa		23.28	■■□□□ 1.32
CNOT7-204	ENST00000518885	ACSBG2	Q5FVE4	666 aa		23.28	■■□□□ 1.32
CNOT7-204	ENST00000518885	ZNF789	Q5FWF6	425 aa		23.28	■■□□□ 1.32

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms