RNA–Protein interactions for RNA: ENST00000517049.1

RNU6-1271P-201, Transcript of RNA, U6 small nuclear 1271, pseudogene, humanhuman

BASIC

Gene RNU6-1271P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1271P-201ENST00000517049 FAM218AQ96MZ4 157 aa1.01□□□□□ -2.25
RNU6-1271P-201ENST00000517049 CCDC28BQ9BUN5 200 aa1.01□□□□□ -2.25
RNU6-1271P-201ENST00000517049 HES7Q9BYE0 225 aa1.01□□□□□ -2.25
RNU6-1271P-201ENST00000517049 HHATLQ9HCP6 504 aa1.01□□□□□ -2.25
RNU6-1271P-201ENST00000517049 RANGRFQ9HD47 186 aaPredicted RBP1.01□□□□□ -2.25
RNU6-1271P-201ENST00000517049 RPS6KB2Q9UBS0 482 aa1.01□□□□□ -2.25
RNU6-1271P-201ENST00000517049 MKLN1Q9UL63 735 aa1.01□□□□□ -2.25
RNU6-1271P-201ENST00000517049 MTUS1Q9ULD2 1270 aa1.01□□□□□ -2.25
RNU6-1271P-201ENST00000517049 LYVE1Q9Y5Y7 322 aa1.01□□□□□ -2.25
RNU6-1271P-201ENST00000517049 PRSS51A0A1B0GVH4 220 aa1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 TRAFD1O14545 582 aaPredicted RBP1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 GJB3O75712 270 aa1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 GIFP27352 417 aa1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 MECOMQ03112 1051 aa1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 NEXNQ0ZGT2 675 aa1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 CDH18Q13634 790 aa1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 TAF5Q15542 800 aa1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 FBXO47Q5MNV8 452 aa1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 MARC1Q5VT66 337 aa1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 LEKR1Q6ZMV7 388 aa1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 CATSPER3Q86XQ3 398 aa1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 EID3Q8N140 333 aa1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 TRIML1Q8N9V2 468 aa1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 OR5T2Q8NGG2 359 aa1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 OR13J1Q8NGT2 312 aa1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 POF1BQ8WVV4 589 aa1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 IRGQQ8WZA9 623 aa1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 MTERF3Q96E29 417 aa1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 S1PR5Q9H228 398 aa1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 ARNT2Q9HBZ2 717 aa1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 CACNG4Q9UBN1 327 aa1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 Q9UF83 564 aa1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 SARDHQ9UL12 918 aa1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 ZNF175Q9Y473 711 aa1□□□□□ -2.25
RNU6-1271P-201ENST00000517049 ITGB4P16144 1822 aa0.99□□□□□ -2.25
RNU6-1271P-201ENST00000517049 IGHV3-38A0A0C4DH36 116 aa0.99□□□□□ -2.25
RNU6-1271P-201ENST00000517049 EIF3CLB5ME19 914 aaKnown RBP0.99□□□□□ -2.25
RNU6-1271P-201ENST00000517049 NPIPB9F8W1W9 429 aa0.99□□□□□ -2.25
RNU6-1271P-201ENST00000517049 TSPAN4O14817 238 aa0.99□□□□□ -2.25
RNU6-1271P-201ENST00000517049 SLC25A12O75746 678 aa0.99□□□□□ -2.25
RNU6-1271P-201ENST00000517049 MYL1P05976 194 aa0.99□□□□□ -2.25
RNU6-1271P-201ENST00000517049 LMO2P25791 158 aa0.99□□□□□ -2.25
RNU6-1271P-201ENST00000517049 ACADLP28330 430 aa0.99□□□□□ -2.25
RNU6-1271P-201ENST00000517049 MSH2P43246 934 aa0.99□□□□□ -2.25
RNU6-1271P-201ENST00000517049 RPL21P46778 160 aaKnown RBP0.99□□□□□ -2.25
RNU6-1271P-201ENST00000517049 CCR5P51681 352 aa0.99□□□□□ -2.25
RNU6-1271P-201ENST00000517049 PRICKLE4Q2TBC4 344 aa0.99□□□□□ -2.25
RNU6-1271P-201ENST00000517049 TMEM139Q8IV31 216 aa0.99□□□□□ -2.25
RNU6-1271P-201ENST00000517049 SGCDQ92629 289 aa0.99□□□□□ -2.25
RNU6-1271P-201ENST00000517049 PYM1Q9BRP8 204 aaKnown RBP0.99□□□□□ -2.25
RNU6-1271P-201ENST00000517049 C1QTNF1Q9BXJ1 281 aa0.99□□□□□ -2.25
RNU6-1271P-201ENST00000517049 OCR1Q9BZK8 76 aa0.99□□□□□ -2.25
RNU6-1271P-201ENST00000517049 FAM49AQ9H0Q0 323 aaPredicted RBP0.99□□□□□ -2.25
RNU6-1271P-201ENST00000517049 ZNF319Q9P2F9 582 aa0.99□□□□□ -2.25
RNU6-1271P-201ENST00000517049 PA2G4Q9UQ80 394 aaKnown RBP0.99□□□□□ -2.25
RNU6-1271P-201ENST00000517049 RIPOR2Q9Y4F9 1068 aa0.99□□□□□ -2.25
RNU6-1271P-201ENST00000517049 KLF18A0A0U1RQI7 1052 aa0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 H3BQ06 376 aaPredicted RBP0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 NDUFS4O43181 175 aa0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 TNFSF14O43557 240 aa0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 PAGE4O60829 102 aa0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 HIST1H2ABP04908 130 aa0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 HIST1H2ADP20671 130 aa0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 PTPN3P26045 913 aa0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 GGT5P36269 586 aa0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 HTR3AP46098 478 aa0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 CTCFP49711 727 aaPredicted RBP0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 GPR143P51810 404 aa0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 EIF3BP55884 814 aaKnown RBP0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 UBE3AQ05086 875 aa0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 PTP4A2Q12974 167 aa0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 EBI3Q14213 229 aa0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 HERC3Q15034 1050 aa0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 TFDP3Q5H9I0 405 aa0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 C9orf66Q5T8R8 295 aa0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 ZNF776Q68DI1 518 aaPredicted RBP0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 TMUB2Q71RG4 321 aa0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 HIST3H2AQ7L7L0 130 aa0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 TPRX1Q8N7U7 411 aa0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 FLVCR1-AS1Q8TAF5 88 aa0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 ZDHHC19Q8WVZ1 309 aaPredicted RBP0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 CFAP57Q96MR6 1250 aa0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 LMF2Q9BU23 707 aaKnown RBP0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 RBM24Q9BX46 236 aaKnown RBP0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 ZNF282Q9UDV7 671 aaPredicted RBP0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 LNPEPQ9UIQ6 1025 aa0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 R3HDM2Q9Y2K5 976 aaKnown RBP0.98□□□□□ -2.25
RNU6-1271P-201ENST00000517049 ZNF541Q9H0D2 1346 aa0.97□□□□□ -2.25
RNU6-1271P-201ENST00000517049 F5H423 210 aaPredicted RBP0.97□□□□□ -2.25
RNU6-1271P-201ENST00000517049 MAGEB4O15481 346 aaPredicted RBP0.97□□□□□ -2.25
RNU6-1271P-201ENST00000517049 HCRTR2O43614 444 aa0.97□□□□□ -2.25
RNU6-1271P-201ENST00000517049 DDHD2O94830 711 aa0.97□□□□□ -2.25
RNU6-1271P-201ENST00000517049 KRT18P05783 430 aaKnown RBP0.97□□□□□ -2.25
RNU6-1271P-201ENST00000517049 IFIT1P09914 478 aaKnown RBP0.97□□□□□ -2.25
RNU6-1271P-201ENST00000517049 RPL35AP18077 110 aaKnown RBP0.97□□□□□ -2.25
RNU6-1271P-201ENST00000517049 TFAP4Q01664 338 aa0.97□□□□□ -2.25
RNU6-1271P-201ENST00000517049 DHODHQ02127 395 aa0.97□□□□□ -2.25
RNU6-1271P-201ENST00000517049 GCNT1Q02742 428 aa0.97□□□□□ -2.25
RNU6-1271P-201ENST00000517049 GARNL3Q5VVW2 1013 aa0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms