RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 CIDEBQ9UHD4 219 aa13.17□□□□□ -0.3
TCOF1-215ENST00000515516 SOX13Q9UN79 622 aa13.17□□□□□ -0.3
TCOF1-215ENST00000515516 VPS9D1Q9Y2B5 631 aa13.17□□□□□ -0.3
TCOF1-215ENST00000515516 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.16□□□□□ -0.3
TCOF1-215ENST00000515516 ESR1P03372 595 aa13.16□□□□□ -0.3
TCOF1-215ENST00000515516 CHRM3P20309 590 aa13.16□□□□□ -0.3
TCOF1-215ENST00000515516 ALAS2P22557 587 aa13.16□□□□□ -0.3
TCOF1-215ENST00000515516 PEBP1P30086 187 aaKnown RBP13.16□□□□□ -0.3
TCOF1-215ENST00000515516 CCNFP41002 786 aa13.16□□□□□ -0.3
TCOF1-215ENST00000515516 PTGIRP43119 386 aa13.16□□□□□ -0.3
TCOF1-215ENST00000515516 CHAF1BQ13112 559 aa13.16□□□□□ -0.3
TCOF1-215ENST00000515516 CPZQ66K79 652 aa13.16□□□□□ -0.3
TCOF1-215ENST00000515516 RHBDD2Q6NTF9 364 aa13.16□□□□□ -0.3
TCOF1-215ENST00000515516 MED25Q71SY5 747 aa13.16□□□□□ -0.3
TCOF1-215ENST00000515516 TAX1BP1Q86VP1 789 aa13.16□□□□□ -0.3
TCOF1-215ENST00000515516 MCATQ8IVS2 390 aaKnown RBP13.16□□□□□ -0.3
TCOF1-215ENST00000515516 TMEM102Q8N9M5 508 aaPredicted RBP13.16□□□□□ -0.3
TCOF1-215ENST00000515516 FLVCR1-AS1Q8TAF5 88 aa13.16□□□□□ -0.3
TCOF1-215ENST00000515516 DLG3Q92796 817 aa13.16□□□□□ -0.3
TCOF1-215ENST00000515516 IP6K3Q96PC2 410 aa13.16□□□□□ -0.3
TCOF1-215ENST00000515516 IL17FQ96PD4 163 aa13.16□□□□□ -0.3
TCOF1-215ENST00000515516 TRIM55Q9BYV6 548 aa13.16□□□□□ -0.3
TCOF1-215ENST00000515516 EURLQ9NYK6 297 aa13.16□□□□□ -0.3
TCOF1-215ENST00000515516 PCDHGA9Q9Y5G4 932 aaKnown RBP13.16□□□□□ -0.3
TCOF1-215ENST00000515516 SPTA1P02549 2419 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 TCRBV7S3A2A0A539 114 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 SDR42E2A6NKP2 422 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 GOLGA8KD6RF30 607 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 E5RI56 91 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 GOLGA8TH3BQL2 631 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 K7EM74 188 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 PEX12O00623 359 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 AVILO75366 819 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 FKBP9O95302 570 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 C1orf105O95561 183 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 IGHEP01854 428 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 CAPN1P07384 714 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 CBSLP0DN79 551 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 PIM1P11309 404 aaPredicted RBP13.15□□□□□ -0.3
TCOF1-215ENST00000515516 MAGP20916 626 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 OTX2P32243 289 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 CBSP35520 551 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 FOLR3P41439 243 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 ARSFP54793 590 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 FOXK1P85037 733 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 THOC5Q13769 683 aaKnown RBP13.15□□□□□ -0.3
TCOF1-215ENST00000515516 KCNJ11Q14654 390 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 SSPNQ14714 243 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 IGFBP7Q16270 282 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 COLEC12Q5KU26 742 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 KIAA0930Q6ICG6 404 aaPredicted RBP13.15□□□□□ -0.3
TCOF1-215ENST00000515516 NEPROQ6NW34 567 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 FIGLAQ6QHK4 219 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 ATCAYQ86WG3 371 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 FAM20CQ8IXL6 584 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 LINC01555Q8NAE3 123 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 ADAMTS17Q8TE56 1095 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 ZUFSPQ96AP4 578 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 XAB2Q9HCS7 855 aaKnown RBP13.15□□□□□ -0.3
TCOF1-215ENST00000515516 DHCR7Q9UBM7 475 aaKnown RBP13.15□□□□□ -0.3
TCOF1-215ENST00000515516 KLHL20Q9Y2M5 609 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 CRYL1Q9Y2S2 319 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 PTRH2Q9Y3E5 179 aaKnown RBP13.15□□□□□ -0.3
TCOF1-215ENST00000515516 ZNF451Q9Y4E5 1061 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 PCDHGB7Q9Y5F8 929 aa13.15□□□□□ -0.3
TCOF1-215ENST00000515516 GOLGA6L10A0A0M3HER8 536 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 CTAGE9A4FU28 777 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 A6NL46 340 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 ZNF185O15231 689 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 ZSCAN12O43309 604 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 HCRTR1O43613 425 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 MLNP12872 115 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 OGNP20774 298 aaKnown RBP13.14□□□□□ -0.31
TCOF1-215ENST00000515516 ARNTP27540 789 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 COILP38432 576 aaPredicted RBP13.14□□□□□ -0.31
TCOF1-215ENST00000515516 MAGEA6P43360 314 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 BDKRB1P46663 353 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 GABRA4P48169 554 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 ADARP55265 1226 aaKnown RBP13.14□□□□□ -0.31
TCOF1-215ENST00000515516 DHX34Q14147 1143 aaKnown RBP13.14□□□□□ -0.31
TCOF1-215ENST00000515516 TYSND1Q2T9J0 566 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 NKAIN1Q4KMZ8 207 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 TCTE1Q5JU00 501 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 CTSL3PQ5NE16 218 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 FAM69BQ5VUD6 431 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 ZNF385CQ66K41 422 aaPredicted RBP13.14□□□□□ -0.31
TCOF1-215ENST00000515516 CNSTQ6PJW8 725 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 CCDC137Q6PK04 289 aaKnown RBP13.14□□□□□ -0.31
TCOF1-215ENST00000515516 RASGEF1CQ8N431 466 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 ZBTB2Q8N680 514 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 TTC29Q8NA56 475 aaPredicted RBP13.14□□□□□ -0.31
TCOF1-215ENST00000515516 GRK7Q8WTQ7 553 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 LPGAT1Q92604 370 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 MS4A14Q96JA4 679 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 FER1L6-AS2Q96M78 137 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 BIRC8Q96P09 236 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 GBP5Q96PP8 586 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 CCDC68Q9H2F9 335 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 FAM114A2Q9NRY5 505 aa13.14□□□□□ -0.31
TCOF1-215ENST00000515516 INTS10Q9NVR2 710 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms