RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 VPS26AO75436 327 aa12.53□□□□□ -0.4
SMAD1-215ENST00000515385 RAD17O75943 681 aa12.53□□□□□ -0.4
SMAD1-215ENST00000515385 DNTTP04053 509 aa12.53□□□□□ -0.4
SMAD1-215ENST00000515385 CYP2A6P11509 494 aaPredicted RBP12.53□□□□□ -0.4
SMAD1-215ENST00000515385 PITX1P78337 314 aaPredicted RBP12.53□□□□□ -0.4
SMAD1-215ENST00000515385 IL1RL1Q01638 556 aa12.53□□□□□ -0.4
SMAD1-215ENST00000515385 PPP1R8Q12972 351 aaKnown RBP12.53□□□□□ -0.4
SMAD1-215ENST00000515385 SDE2Q6IQ49 451 aa12.53□□□□□ -0.4
SMAD1-215ENST00000515385 TMPRSS11AQ6ZMR5 421 aa12.53□□□□□ -0.4
SMAD1-215ENST00000515385 ZNF782Q6ZMW2 699 aaPredicted RBP12.53□□□□□ -0.4
SMAD1-215ENST00000515385 FAM83AQ86UY5 434 aa12.53□□□□□ -0.4
SMAD1-215ENST00000515385 RYBPQ8N488 228 aaPredicted RBP12.53□□□□□ -0.4
SMAD1-215ENST00000515385 CHCHD4Q8N4Q1 142 aa12.53□□□□□ -0.4
SMAD1-215ENST00000515385 FAM181AQ8N9Y4 354 aa12.53□□□□□ -0.4
SMAD1-215ENST00000515385 TP53I13Q8NBR0 393 aaPredicted RBP12.53□□□□□ -0.4
SMAD1-215ENST00000515385 KCTD13Q8WZ19 329 aa12.53□□□□□ -0.4
SMAD1-215ENST00000515385 PABPC5Q96DU9 382 aaKnown RBP12.53□□□□□ -0.4
SMAD1-215ENST00000515385 PGAP3Q96FM1 320 aaPredicted RBP12.53□□□□□ -0.4
SMAD1-215ENST00000515385 CHCHD6Q9BRQ6 235 aa12.53□□□□□ -0.4
SMAD1-215ENST00000515385 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.53□□□□□ -0.4
SMAD1-215ENST00000515385 SEMA4BQ9NPR2 832 aaPredicted RBP12.53□□□□□ -0.4
SMAD1-215ENST00000515385 KRT84Q9NSB2 600 aa12.53□□□□□ -0.4
SMAD1-215ENST00000515385 WDR70Q9NW82 654 aa12.53□□□□□ -0.4
SMAD1-215ENST00000515385 VAPAQ9P0L0 249 aa12.53□□□□□ -0.4
SMAD1-215ENST00000515385 MAFFQ9ULX9 164 aa12.53□□□□□ -0.4
SMAD1-215ENST00000515385 SAMD4AQ9UPU9 718 aaKnown RBP12.53□□□□□ -0.4
SMAD1-215ENST00000515385 NME7Q9Y5B8 376 aa12.53□□□□□ -0.4
SMAD1-215ENST00000515385 KCNE2Q9Y6J6 123 aa12.53□□□□□ -0.4
SMAD1-215ENST00000515385 TRIP11Q15643 1979 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 DICER1Q9UPY3 1922 aaKnown RBP12.52□□□□□ -0.4
SMAD1-215ENST00000515385 EFCAB10A6NFE3 127 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 SUPT3HB4E1H0 165 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 NDUFA2O43678 99 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 KIAA0513O60268 411 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 SERPINA1P01009 418 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 CD9P21926 228 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 GRK5P34947 590 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 RPP38P78345 283 aaKnown RBP12.52□□□□□ -0.4
SMAD1-215ENST00000515385 ADIGQ0VDE8 80 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 HYAL2Q12891 473 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 BAMBIQ13145 260 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 QPRTQ15274 297 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 BTBD16Q32M84 506 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 TRIM60Q495X7 471 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 RUNDC3AQ59EK9 446 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 C19orf48Q6RUI8 117 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 NIM1KQ8IY84 436 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 CYP4Z2PQ8N1L4 340 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 YIPF7Q8N8F6 280 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 OR2T11Q8NH01 316 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 APH1BQ8WW43 257 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 SLC13A3Q8WWT9 602 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 DNASE1L2Q92874 299 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 AP2M1Q96CW1 435 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 ATG4CQ96DT6 458 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 CDCA5Q96FF9 252 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 MAGEB10Q96LZ2 347 aaPredicted RBP12.52□□□□□ -0.4
SMAD1-215ENST00000515385 MCCC1Q96RQ3 725 aaPredicted RBP12.52□□□□□ -0.4
SMAD1-215ENST00000515385 LPIN3Q9BQK8 851 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 SRRQ9GZT4 340 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 KIF17Q9P2E2 1029 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 SPASTQ9UBP0 616 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 AASSQ9UDR5 926 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 MAPRE3Q9UPY8 281 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 V9GYH0 126 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 MGAMO43451 1857 aa12.52□□□□□ -0.4
SMAD1-215ENST00000515385 ZNF646O15015 1829 aaPredicted RBP12.52□□□□□ -0.4
SMAD1-215ENST00000515385 UBR3Q6ZT12 1888 aa12.52□□□□□ -0.41
SMAD1-215ENST00000515385 B4DXG7 233 aa12.52□□□□□ -0.41
SMAD1-215ENST00000515385 TFECO14948 347 aaPredicted RBP12.52□□□□□ -0.41
SMAD1-215ENST00000515385 PCDHGA12O60330 932 aa12.52□□□□□ -0.41
SMAD1-215ENST00000515385 EPN2O95208 641 aa12.52□□□□□ -0.41
SMAD1-215ENST00000515385 PRLP01236 227 aa12.52□□□□□ -0.41
SMAD1-215ENST00000515385 ZNF37AP17032 561 aaPredicted RBP12.52□□□□□ -0.41
SMAD1-215ENST00000515385 ITGB6P18564 788 aa12.52□□□□□ -0.41
SMAD1-215ENST00000515385 UBA1P22314 1058 aaKnown RBP12.52□□□□□ -0.41
SMAD1-215ENST00000515385 HOXA9P31269 272 aa12.52□□□□□ -0.41
SMAD1-215ENST00000515385 GMPSP49915 693 aaPredicted RBP12.52□□□□□ -0.41
SMAD1-215ENST00000515385 CREMQ03060 361 aa12.52□□□□□ -0.41
SMAD1-215ENST00000515385 SMARCB1Q12824 385 aa12.52□□□□□ -0.41
SMAD1-215ENST00000515385 NPRL3Q12980 569 aa12.52□□□□□ -0.41
SMAD1-215ENST00000515385 GNA13Q14344 377 aa12.52□□□□□ -0.41
SMAD1-215ENST00000515385 SEMA3AQ14563 771 aa12.52□□□□□ -0.41
SMAD1-215ENST00000515385 SLC35F1Q5T1Q4 408 aa12.52□□□□□ -0.41
SMAD1-215ENST00000515385 SHEQ5VZ18 495 aa12.52□□□□□ -0.41
SMAD1-215ENST00000515385 RAP1GAP2Q684P5 730 aa12.52□□□□□ -0.41
SMAD1-215ENST00000515385 ENTHD1Q8IYW4 607 aa12.52□□□□□ -0.41
SMAD1-215ENST00000515385 DNAJC22Q8N4W6 341 aa12.52□□□□□ -0.41
SMAD1-215ENST00000515385 GLB1L3Q8NCI6 653 aaPredicted RBP12.52□□□□□ -0.41
SMAD1-215ENST00000515385 HERVK_113Q902F9 699 aa12.52□□□□□ -0.41
SMAD1-215ENST00000515385 ELMO1Q92556 727 aa12.52□□□□□ -0.41
SMAD1-215ENST00000515385 HRASLS5Q96KN8 279 aa12.52□□□□□ -0.41
SMAD1-215ENST00000515385 KCNS3Q9BQ31 491 aa12.52□□□□□ -0.41
SMAD1-215ENST00000515385 DPEP3Q9H4B8 488 aa12.52□□□□□ -0.41
SMAD1-215ENST00000515385 TIGARQ9NQ88 270 aa12.52□□□□□ -0.41
SMAD1-215ENST00000515385 RASSF1Q9NS23 344 aa12.52□□□□□ -0.41
SMAD1-215ENST00000515385 C1orf109Q9NX04 203 aa12.52□□□□□ -0.41
SMAD1-215ENST00000515385 MRPL39Q9NYK5 338 aaKnown RBP12.52□□□□□ -0.41
SMAD1-215ENST00000515385 EVLQ9UI08 416 aaPredicted RBP12.52□□□□□ -0.41
SMAD1-215ENST00000515385 TMCC3Q9ULS5 477 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms