RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 TEDDM1Q5T9Z0 273 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 DPY19L3Q6ZPD9 716 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 NLRC3Q7RTR2 1065 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 PID1Q7Z2X4 250 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 TAC4Q86UU9 113 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 ZNF354CQ86Y25 554 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 DCP1BQ8IZD4 617 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 ZCCHC7Q8N3Z6 543 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 KDF1Q8NAX2 398 aaPredicted RBP7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 EDEM1Q92611 657 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 TCEAL3Q969E4 200 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 MRPL48Q96GC5 212 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 SMARCD1Q96GM5 515 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 QRFPRQ96P65 431 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 GPR61Q9BZJ8 451 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.33□□□□□ -1.243e-8■■■□□ 14.8
PDLIM5-219ENST00000514743 QRSL1Q9H0R6 528 aaKnown RBP7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 DDIT4Q9NX09 232 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 ING3Q9NXR8 418 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 SLC27A5Q9Y2P5 690 aa7.33□□□□□ -1.24
PDLIM5-219ENST00000514743 LDLRAD4O15165 306 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 TSPAN6O43657 245 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 GLRA3O75311 464 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 DUSP11O75319 330 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 LRIG2O94898 1065 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 APOL3O95236 402 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 KLK3P07288 261 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 AKR1A1P14550 325 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 CAPN3P20807 821 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 ATP5C1P36542 298 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 ALDH7A1P49419 539 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 RAD23AP54725 363 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 IFRD2Q12894 506 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 PMS2P3Q13401 168 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 TMEM44Q2T9K0 475 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 ZMAT1Q5H9K5 638 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 INTS6LQ5JSJ4 861 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 LIPIQ6XZB0 460 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 TMEM26Q6ZUK4 368 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 NUP54Q7Z3B4 507 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 LYSMD3Q7Z3D4 306 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 C16orf62Q7Z3J2 963 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 SERINC5Q86VE9 423 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 ZNF227Q86WZ6 799 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 ZC3H7AQ8IWR0 971 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 ZNF420Q8TAQ5 688 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 ZHX1-C8orf76Q96EF9 292 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 ATXN7L3BQ96GX2 97 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 MS4A3Q96HJ5 214 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 TMEM209Q96SK2 561 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 ZBTB18Q99592 522 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 RBBP8Q99708 897 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 NAT9Q9BTE0 207 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 TKTL2Q9H0I9 626 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 SEMA6AQ9H2E6 1030 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 CXorf21Q9HAI6 301 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 NMUR1Q9HB89 426 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 ACSS2Q9NR19 701 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 ACOXLQ9NUZ1 547 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 ZNF358Q9NW07 568 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 KLHL8Q9P2G9 620 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 RAB23Q9ULC3 237 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 PLA2G4CQ9UP65 541 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 DMRT1Q9Y5R6 373 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 PDZK1P1A8MUH7 402 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 C3orf80F5H4A9 247 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 ZNF195O14628 629 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 CACNG3O60359 315 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 POMCP01189 267 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 ZNF806P0C7X5 589 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 CYBAP13498 195 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 NFKB1P19838 968 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 ARCN1P48444 511 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 RPIAP49247 311 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 PGFP49763 221 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 ZNF33AQ06730 810 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 NFATC3Q12968 1075 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 ADGRE1Q14246 886 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 ZNF273Q14593 569 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 PRMT9Q6P2P2 845 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 FUT10Q6P4F1 479 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 CXCL17Q6UXB2 119 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 CMC1Q7Z7K0 106 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 CLEC14AQ86T13 490 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 TMC8Q8IU68 726 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 PLD6Q8N2A8 252 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 ACVR1CQ8NER5 493 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 OR10T2Q8NGX3 314 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 ACDQ96AP0 544 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 LURAP1Q96LR2 239 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 AGAP2Q99490 1192 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 IL12RB2Q99665 862 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 EFHD1Q9BUP0 239 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 ZYG11BQ9C0D3 744 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 GMPR2Q9P2T1 348 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 MYRFQ9Y2G1 1151 aa7.32□□□□□ -1.24
PDLIM5-219ENST00000514743 PRKD3O94806 890 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 CCNB2O95067 398 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 CYP11A1P05108 521 aa7.31□□□□□ -1.24
PDLIM5-219ENST00000514743 GSNP06396 782 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms