RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 MS4A14Q96JA4 679 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 IL17FQ96PD4 163 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 GBP5Q96PP8 586 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 TCF12Q99081 682 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 DHRS4Q9BTZ2 278 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 SLC7A5P2Q9GIP4 190 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 SPRTNQ9H040 489 aaPredicted RBP10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 CIDEBQ9UHD4 219 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 SRPK3Q9UPE1 567 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 PLCL2Q9UPR0 1127 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 NEU2Q9Y3R4 380 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 NFS1Q9Y697 457 aa10.07□□□□□ -0.8
HMGXB3-205ENST00000514469 PCSK5Q92824 1860 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 FAM237BA0A1B0GVD1 139 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 H3BMM5 538 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 PGRMC1O00264 195 aaKnown RBP10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 PFDN6O15212 129 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 PRICKLE3O43900 615 aaPredicted RBP10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 NIPSNAP2O75323 286 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 KLF7O75840 302 aaPredicted RBP10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 CEACAM4O75871 244 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 FKBP9O95302 570 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 ESR1P03372 595 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 CBSLP0DN79 551 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 PAMP19021 973 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 AGXTP21549 392 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 CBSP35520 551 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 COILP38432 576 aaPredicted RBP10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 CCNFP41002 786 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 MAGEA3P43357 314 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 BDKRB1P46663 353 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 TERF1P54274 439 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 FOXK1P85037 733 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 CHAF1BQ13112 559 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 CCSMST1Q4G0I0 132 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 PAPD7Q5XG87 772 aaKnown RBP10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 FCRL6Q6DN72 434 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 TLDC1Q6P9B6 456 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 CCDC137Q6PK04 289 aaKnown RBP10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 SDCCAG8Q86SQ7 713 aaPredicted RBP10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 TAX1BP1Q86VP1 789 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 CILP2Q8IUL8 1156 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 FAM20CQ8IXL6 584 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 ZBTB2Q8N680 514 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 ZNF655Q8N720 491 aaPredicted RBP10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 MCUQ8NE86 351 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 GSDMBQ8TAX9 411 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 HMGCLL1Q8TB92 370 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 DENND1AQ8TEH3 1009 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 MAGOHBQ96A72 148 aaKnown RBP10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 RAD51AP1Q96B01 352 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 SERPINB12Q96P63 405 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 NAP1L3Q99457 506 aaPredicted RBP10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 C17orf62Q9BQA9 187 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 TRIM56Q9BRZ2 755 aaKnown RBP10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 ING2Q9H160 280 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 XAB2Q9HCS7 855 aaKnown RBP10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 MLXIPLQ9NP71 852 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 ENAMQ9NRM1 1142 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 EURLQ9NYK6 297 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 SAMD15Q9P1V8 674 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 RUVBL2Q9Y230 463 aaKnown RBP10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 PADI2Q9Y2J8 665 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 KLHL20Q9Y2M5 609 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 PCDHGA9Q9Y5G4 932 aaKnown RBP10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 KLK4Q9Y5K2 254 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 MRFAP1Q9Y605 127 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 FLNCQ14315 2725 aa10.06□□□□□ -0.8
HMGXB3-205ENST00000514469 RELNP78509 3460 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 PIKFYVEQ9Y2I7 2098 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 ZCWPW2A0A1B0GU75 182 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 KRT87PA6NCN2 255 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 PHF2O75151 1096 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 MATN4O95460 622 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 ITGAXP20702 1163 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 FMO4P31512 558 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 FNTAP49354 379 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 DCDP81605 110 aaKnown RBP10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 ATP1A4Q13733 1029 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 ANKRD20A4Q4UJ75 823 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 C1orf189Q5VU69 101 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 MRPL14Q6P1L8 145 aaKnown RBP10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 CASC4Q6P4E1 433 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 TTC23LQ6PF05 361 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 CNSTQ6PJW8 725 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 CENPUQ71F23 418 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 RAB43Q86YS6 212 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 REXO1L1PQ8IX06 675 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 AGGF1Q8N302 714 aaeCLIP10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 SLC35F6Q8N357 371 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 C2orf73Q8N5S3 287 aaPredicted RBP10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 ACTRT1Q8TDG2 376 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 COG1Q8WTW3 980 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 DLG3Q92796 817 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 ZNF669Q96BR6 464 aaPredicted RBP10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 FOPNLQ96NB1 174 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 ZNF285Q96NJ3 590 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 OSBPL9Q96SU4 736 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 ACSS2Q9NR19 701 aa10.05□□□□□ -0.8
HMGXB3-205ENST00000514469 INTS7Q9NVH2 962 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms