RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 HAUS8Q9BT25 410 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 RAB11FIP5Q9BXF6 653 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 SPATA7Q9P0W8 599 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 PCOLCE2Q9UKZ9 415 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 KCNK6Q9Y257 313 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 CA5BQ9Y2D0 317 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 TDRKHQ9Y2W6 561 aaKnown RBP15.55■□□□□ 0.08
NUP54-214ENST00000514307 DYRK1BQ9Y463 629 aa15.55■□□□□ 0.08
NUP54-214ENST00000514307 PCYT1BQ9Y5K3 369 aaPredicted RBP15.55■□□□□ 0.08
NUP54-214ENST00000514307 MUC3AQ02505 3323 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 PRR19A6NJB7 356 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 MEI4A8MW99 385 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 TMEM233B4DJY2 109 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 H0Y8X5 98 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 UBDO15205 165 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 SKAP2O75563 359 aaPredicted RBP15.54■□□□□ 0.08
NUP54-214ENST00000514307 UBOX5O94941 541 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 CAPN1P07384 714 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 ESRRAP11474 423 aaPredicted RBP15.54■□□□□ 0.08
NUP54-214ENST00000514307 CTSEP14091 401 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 RPL10P27635 214 aaKnown RBP15.54■□□□□ 0.08
NUP54-214ENST00000514307 CD38P28907 300 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 HNF4AP41235 474 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 RACK1P63244 317 aaKnown RBP15.54■□□□□ 0.08
NUP54-214ENST00000514307 IRF8Q02556 426 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 TUBB3Q13509 450 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 HIST2H2ACQ16777 129 aaPredicted RBP15.54■□□□□ 0.08
NUP54-214ENST00000514307 GLIPR1L2Q4G1C9 344 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 HIST2H2AA3Q6FI13 130 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 XKR5Q6UX68 686 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 RNF165Q6ZSG1 346 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 ALYREFQ86V81 257 aaKnown RBP15.54■□□□□ 0.08
NUP54-214ENST00000514307 PARP9Q8IXQ6 854 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 FAM160A2Q8N612 972 aaPredicted RBP15.54■□□□□ 0.08
NUP54-214ENST00000514307 CPSF7Q8N684 471 aaKnown RBP15.54■□□□□ 0.08
NUP54-214ENST00000514307 L3MBTL4Q8NA19 623 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 SPDYE1Q8NFV5 336 aaPredicted RBP15.54■□□□□ 0.08
NUP54-214ENST00000514307 OR52B6Q8NGF0 335 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 ZNF480Q8WV37 535 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 ZFPM2Q8WW38 1151 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 SH3KBP1Q96B97 665 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 CMTM5Q96DZ9 223 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 CAMK1GQ96NX5 476 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 OR52B2Q96RD2 323 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 GSDMCQ9BYG8 508 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 INTS7Q9NVH2 962 aaKnown RBP15.54■□□□□ 0.08
NUP54-214ENST00000514307 ASB1Q9Y576 335 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 TIMM22Q9Y584 194 aa15.54■□□□□ 0.08
NUP54-214ENST00000514307 PLXNB3Q9ULL4 1909 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 OR5K4A6NMS3 321 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 K7ESF4 209 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 PIP5K1BO14986 540 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 RGS14O43566 566 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 LINC00032P0C843 101 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 SLC2A4P14672 509 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 LBPP18428 481 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 ITPKAP23677 461 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 IMPA1P29218 277 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 CASP2P42575 452 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 TRAF3Q13114 568 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 LAPTM5Q13571 262 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 ZRSR2Q15696 482 aaKnown RBP15.53■□□□□ 0.08
NUP54-214ENST00000514307 RPE65Q16518 533 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 CYP2A13Q16696 494 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 ALG11Q2TAA5 492 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 CCSMST1Q4G0I0 132 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 GGTA1PQ4G0N0 100 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 LARP4Q71RC2 724 aaKnown RBP eCLIP15.53■□□□□ 0.08
NUP54-214ENST00000514307 MYLK4Q86YV6 388 aaPredicted RBP15.53■□□□□ 0.08
NUP54-214ENST00000514307 FRMD1Q8N878 549 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 OR5AR1Q8NGP9 310 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 SMPDL3AQ92484 453 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 PYCR2Q96C36 320 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 TUBGCP3Q96CW5 907 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 PPP1R36Q96LQ0 422 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 SGPP1Q9BX95 441 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 NMUR2Q9GZQ4 415 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 DUSP15Q9H1R2 295 aaPredicted RBP15.53■□□□□ 0.08
NUP54-214ENST00000514307 TNFRSF12AQ9NP84 129 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 CD320Q9NPF0 282 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 INVSQ9Y283 1065 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 RNF11Q9Y3C5 154 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 PLEKHM1Q9Y4G2 1056 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 C5orf42Q9H799 3197 aa15.53■□□□□ 0.08
NUP54-214ENST00000514307 BPTFQ12830 3046 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 TRPM6Q9BX84 2022 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 E7ENX8 843 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 E9PBE3 544 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 TLR4O00206 839 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 LAMTOR5O43504 91 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 KLHL41O60662 606 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 THRAP10827 490 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 NPPBP16860 134 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 AOC1P19801 751 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 PRDX3P30048 256 aaKnown RBP15.52■□□□□ 0.08
NUP54-214ENST00000514307 TAP2Q03519 686 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 CHIT1Q13231 466 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 PRKG2Q13237 762 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 RPS6KA2Q15349 733 aa15.52■□□□□ 0.08
NUP54-214ENST00000514307 SMU1Q2TAY7 513 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms