RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 RMND5AQ9H871 391 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 FARSBQ9NSD9 589 aaKnown RBP11.3□□□□□ -0.6
SNX25-205ENST00000512853 WWOXQ9NZC7 414 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 SCHIP1Q9P0W5 487 aaPredicted RBP11.3□□□□□ -0.6
SNX25-205ENST00000512853 OSGIN1Q9UJX0 560 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 ZNF490Q9ULM2 529 aaPredicted RBP11.3□□□□□ -0.6
SNX25-205ENST00000512853 NDRG4Q9ULP0 352 aaKnown RBP11.3□□□□□ -0.6
SNX25-205ENST00000512853 SAMD4AQ9UPU9 718 aaKnown RBP11.3□□□□□ -0.6
SNX25-205ENST00000512853 ANGPTL3Q9Y5C1 460 aa11.3□□□□□ -0.6
SNX25-205ENST00000512853 GPC6Q9Y625 555 aaPredicted RBP11.3□□□□□ -0.6
SNX25-205ENST00000512853 RGS10O43665 173 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 MAN1A2O60476 641 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 ULK1O75385 1050 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 CLDN11O75508 207 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 EFNA1P20827 205 aaPredicted RBP11.29□□□□□ -0.6
SNX25-205ENST00000512853 FPR1P21462 350 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 FSHRP23945 695 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 EIF2DP41214 584 aaKnown RBP11.29□□□□□ -0.6
SNX25-205ENST00000512853 PIK3CGP48736 1102 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 DAPP51397 102 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 CLDN8P56748 225 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 VBP1P61758 197 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 RPS14P62263 151 aaKnown RBP11.29□□□□□ -0.6
SNX25-205ENST00000512853 MRPL58Q14197 206 aaKnown RBP11.29□□□□□ -0.6
SNX25-205ENST00000512853 MAD2L1BPQ15013 274 aaPredicted RBP11.29□□□□□ -0.6
SNX25-205ENST00000512853 CTXN3Q4LDR2 81 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 PAGE2BQ5JRK9 111 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 PTRHD1Q6GMV3 140 aaKnown RBP11.29□□□□□ -0.6
SNX25-205ENST00000512853 OR2T5Q6IEZ7 315 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 GLB1LQ6UWU2 654 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 CEP68Q76N32 757 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 CHST9Q7L1S5 443 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 OR2T29Q8NH02 315 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 HHIPQ96QV1 700 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 BARD1Q99728 777 aaKnown RBP11.29□□□□□ -0.6
SNX25-205ENST00000512853 APOL4Q9BPW4 351 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 ZFP14Q9HCL3 533 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 ACOT13Q9NPJ3 140 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 THG1LQ9NWX6 298 aaKnown RBP11.29□□□□□ -0.6
SNX25-205ENST00000512853 ANKMY1Q9P2S6 941 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 TSR3Q9UJK0 312 aaKnown RBP11.29□□□□□ -0.6
SNX25-205ENST00000512853 U3KQV3 271 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 OR2A25A4D2G3 310 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 MTMR11A4FU01 709 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 CLDN24A6NM45 220 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 ARVCFO00192 962 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 GPR39O43194 453 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 FZD6O60353 706 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 SEC22BO75396 215 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 CCNDBP1O95273 360 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 GUCA1CO95843 209 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 PRPS2P11908 318 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 PCSK2P16519 638 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 ZNF7P17097 686 aaPredicted RBP11.29□□□□□ -0.6
SNX25-205ENST00000512853 DGKAP23743 735 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 PSMB9P28065 219 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 SLC11A2P49281 568 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 NCS1P62166 190 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 RPS24P62847 133 aaKnown RBP11.29□□□□□ -0.6
SNX25-205ENST00000512853 PTPRRQ15256 657 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 PHKG1Q16816 387 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 CCDC92Q53HC0 331 aaPredicted RBP11.29□□□□□ -0.6
SNX25-205ENST00000512853 FAM26DQ5JW98 314 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 CLLU1OSQ5K130 101 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 C9orf131Q5VYM1 1079 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 GALNT5Q7Z7M9 940 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 SNX29P2Q8IUI4 249 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 IPCEF1Q8WWN9 437 aaPredicted RBP11.29□□□□□ -0.6
SNX25-205ENST00000512853 TESCQ96BS2 214 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 EFHD2Q96C19 240 aaPredicted RBP11.29□□□□□ -0.6
SNX25-205ENST00000512853 CCDC97Q96F63 343 aaPredicted RBP11.29□□□□□ -0.6
SNX25-205ENST00000512853 CDK5RAP1Q96SZ6 601 aaKnown RBP11.29□□□□□ -0.6
SNX25-205ENST00000512853 ASPSCR1Q9BZE9 553 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 CLPBQ9H078 707 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 RDH14Q9HBH5 336 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 SPC25Q9HBM1 224 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 LHX3Q9UBR4 397 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 ABCG2Q9UNQ0 655 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 FNDC3AQ9Y2H6 1198 aaKnown RBP11.29□□□□□ -0.6
SNX25-205ENST00000512853 GMPPBQ9Y5P6 360 aa11.29□□□□□ -0.6
SNX25-205ENST00000512853 NPIPB8E9PQR5 432 aa11.28□□□□□ -0.6
SNX25-205ENST00000512853 GAPDHSO14556 408 aaPredicted RBP11.28□□□□□ -0.6
SNX25-205ENST00000512853 FAM20BO75063 409 aa11.28□□□□□ -0.6
SNX25-205ENST00000512853 VNN2O95498 520 aa11.28□□□□□ -0.6
SNX25-205ENST00000512853 FADS2O95864 444 aaKnown RBP11.28□□□□□ -0.6
SNX25-205ENST00000512853 EIF2S1P05198 315 aaKnown RBP11.28□□□□□ -0.6
SNX25-205ENST00000512853 PRPH2P23942 346 aa11.28□□□□□ -0.6
SNX25-205ENST00000512853 HOXA9P31269 272 aa11.28□□□□□ -0.6
SNX25-205ENST00000512853 DNAJA1P31689 397 aaKnown RBP11.28□□□□□ -0.6
SNX25-205ENST00000512853 S100A3P33764 101 aa11.28□□□□□ -0.6
SNX25-205ENST00000512853 UGT2B10P36537 528 aa11.28□□□□□ -0.6
SNX25-205ENST00000512853 OR1G1P47890 313 aa11.28□□□□□ -0.6
SNX25-205ENST00000512853 PPP5CP53041 499 aa11.28□□□□□ -0.6
SNX25-205ENST00000512853 UBE2UQ5VVX9 321 aa11.28□□□□□ -0.6
SNX25-205ENST00000512853 ZNF551Q7Z340 670 aaPredicted RBP11.28□□□□□ -0.6
SNX25-205ENST00000512853 SERPINA9Q86WD7 417 aa11.28□□□□□ -0.6
SNX25-205ENST00000512853 FAM9CQ8IZT9 166 aa11.28□□□□□ -0.6
SNX25-205ENST00000512853 RBFAQ8N0V3 343 aa11.28□□□□□ -0.6
SNX25-205ENST00000512853 CLHC1Q8NHS4 586 aa11.28□□□□□ -0.6
SNX25-205ENST00000512853 RHOXF1Q8NHV9 184 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms