RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 CAPN13Q6MZZ7 669 aaPredicted RBP10.55□□□□□ -0.72
PFDN1-204ENST00000512707 KLHL35Q6PF15 583 aa10.55□□□□□ -0.72
PFDN1-204ENST00000512707 AGTRAPQ6RW13 159 aa10.55□□□□□ -0.72
PFDN1-204ENST00000512707 LRRC70Q7Z2Q7 622 aa10.55□□□□□ -0.72
PFDN1-204ENST00000512707 SPNS2Q8IVW8 549 aa10.55□□□□□ -0.72
PFDN1-204ENST00000512707 HOMEZQ8IX15 550 aa10.55□□□□□ -0.72
PFDN1-204ENST00000512707 TMEM151AQ8N4L1 468 aa10.55□□□□□ -0.72
PFDN1-204ENST00000512707 UBTD2Q8WUN7 234 aa10.55□□□□□ -0.72
PFDN1-204ENST00000512707 CKAP2Q8WWK9 683 aa10.55□□□□□ -0.72
PFDN1-204ENST00000512707 LCN9Q8WX39 176 aa10.55□□□□□ -0.72
PFDN1-204ENST00000512707 DLG3Q92796 817 aa10.55□□□□□ -0.72
PFDN1-204ENST00000512707 RHBDF1Q96CC6 855 aa10.55□□□□□ -0.72
PFDN1-204ENST00000512707 L3HYPDHQ96EM0 354 aa10.55□□□□□ -0.72
PFDN1-204ENST00000512707 MED8Q96G25 268 aa10.55□□□□□ -0.72
PFDN1-204ENST00000512707 PKP4Q99569 1192 aa10.55□□□□□ -0.72
PFDN1-204ENST00000512707 CD244Q9BZW8 370 aa10.55□□□□□ -0.72
PFDN1-204ENST00000512707 PCBD2Q9H0N5 130 aa10.55□□□□□ -0.72
PFDN1-204ENST00000512707 KIR3DX1Q9H7L2 352 aa10.55□□□□□ -0.72
PFDN1-204ENST00000512707 CCDC177Q9NQR7 707 aaPredicted RBP10.55□□□□□ -0.72
PFDN1-204ENST00000512707 STOX2Q9P2F5 926 aaPredicted RBP10.55□□□□□ -0.72
PFDN1-204ENST00000512707 CPNE7Q9UBL6 633 aa10.55□□□□□ -0.72
PFDN1-204ENST00000512707 PTBP2Q9UKA9 531 aaKnown RBP10.55□□□□□ -0.72
PFDN1-204ENST00000512707 NCOR2Q9Y618 2525 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 TRBV23OR9-2A0A075B6M9 112 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 FAM221BA6H8Z2 402 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 RHPN2P1A8MT19 583 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 KLF11O14901 512 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 NPHS1O60500 1241 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 CCNT2O60583 730 aaKnown RBP10.54□□□□□ -0.72
PFDN1-204ENST00000512707 LRP3O75074 770 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 HSPA4LO95757 839 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 MLYCDO95822 493 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 EPB42P16452 691 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 BGNP21810 368 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 GGT5P36269 586 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 ARL1P40616 181 aaPredicted RBP10.54□□□□□ -0.72
PFDN1-204ENST00000512707 SLC19A1P41440 591 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 TSTA3Q13630 321 aaPredicted RBP10.54□□□□□ -0.72
PFDN1-204ENST00000512707 RCN2Q14257 317 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 PCBP2Q15366 365 aaKnown RBP eCLIP10.54□□□□□ -0.72
PFDN1-204ENST00000512707 C14orf28Q4W4Y0 310 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 PLA2G2CQ5R387 149 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 ZNF678Q5SXM1 525 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 THEMIS2Q5TEJ8 643 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 ZCCHC8Q6NZY4 707 aaKnown RBP10.54□□□□□ -0.72
PFDN1-204ENST00000512707 DUS1LQ6P1R4 473 aaKnown RBP10.54□□□□□ -0.72
PFDN1-204ENST00000512707 MBOAT1Q6ZNC8 495 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 NAGSQ8N159 534 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 AFAP1L2Q8N4X5 818 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 MINDY1Q8N5J2 469 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 ARL10Q8N8L6 244 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 SNX31Q8N9S9 440 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 OR6C4Q8NGE1 309 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 OR52E1Q8NGJ3 308 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 SLC37A2Q8TED4 501 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 SMPDL3AQ92484 453 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 ZNF75CPQ92670 426 aaPredicted RBP10.54□□□□□ -0.72
PFDN1-204ENST00000512707 ATP6V1E2Q96A05 226 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 CNDP1Q96KN2 507 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 TMEM237Q96Q45 408 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 SRMSQ9H3Y6 488 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 SLC32A1Q9H598 525 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 SLC40A1Q9NP59 571 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 DNAJC11Q9NVH1 559 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 UCKL1Q9NWZ5 548 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 OR6C2Q9NZP2 312 aa10.54□□□□□ -0.72
PFDN1-204ENST00000512707 SCHIP1Q9P0W5 487 aaPredicted RBP10.54□□□□□ -0.72
PFDN1-204ENST00000512707 ZNF624Q9P2J8 865 aaPredicted RBP10.54□□□□□ -0.72
PFDN1-204ENST00000512707 TPRP12270 2363 aaKnown RBP10.54□□□□□ -0.72
PFDN1-204ENST00000512707 K7EPI3 171 aa10.53□□□□□ -0.72
PFDN1-204ENST00000512707 PCDHGA12O60330 932 aa10.53□□□□□ -0.72
PFDN1-204ENST00000512707 WDR47O94967 919 aa10.53□□□□□ -0.72
PFDN1-204ENST00000512707 EML2O95834 649 aa10.53□□□□□ -0.72
PFDN1-204ENST00000512707 LMNAP02545 664 aaKnown RBP10.53□□□□□ -0.72
PFDN1-204ENST00000512707 VIMP08670 466 aaKnown RBP10.53□□□□□ -0.72
PFDN1-204ENST00000512707 ZNF806P0C7X5 589 aa10.53□□□□□ -0.72
PFDN1-204ENST00000512707 ZNF883P0CG24 379 aa10.53□□□□□ -0.72
PFDN1-204ENST00000512707 FGF3P11487 239 aaPredicted RBP10.53□□□□□ -0.72
PFDN1-204ENST00000512707 IMPA1P29218 277 aa10.53□□□□□ -0.72
PFDN1-204ENST00000512707 PKLRP30613 574 aa10.53□□□□□ -0.72
PFDN1-204ENST00000512707 FASLGP48023 281 aa10.53□□□□□ -0.72
PFDN1-204ENST00000512707 HSPA7P48741 367 aa10.53□□□□□ -0.72
PFDN1-204ENST00000512707 PPM1FP49593 454 aaPredicted RBP10.53□□□□□ -0.72
PFDN1-204ENST00000512707 TBPL1P62380 186 aa10.53□□□□□ -0.72
PFDN1-204ENST00000512707 UBE2IP63279 158 aaKnown RBP10.53□□□□□ -0.72
PFDN1-204ENST00000512707 BNIP3Q12983 259 aa10.53□□□□□ -0.72
PFDN1-204ENST00000512707 LCP2Q13094 533 aa10.53□□□□□ -0.72
PFDN1-204ENST00000512707 PRKAA1Q13131 559 aa10.53□□□□□ -0.72
PFDN1-204ENST00000512707 NAE1Q13564 534 aa10.53□□□□□ -0.72
PFDN1-204ENST00000512707 CCDC6Q16204 474 aa10.53□□□□□ -0.72
PFDN1-204ENST00000512707 RBBP7Q16576 425 aa10.53□□□□□ -0.72
PFDN1-204ENST00000512707 CYP2A13Q16696 494 aa10.53□□□□□ -0.72
PFDN1-204ENST00000512707 PTCHD3Q3KNS1 767 aa10.53□□□□□ -0.72
PFDN1-204ENST00000512707 CCSMST1Q4G0I0 132 aa10.53□□□□□ -0.72
PFDN1-204ENST00000512707 ARMC6Q6NXE6 501 aa10.53□□□□□ -0.72
PFDN1-204ENST00000512707 OGFOD3Q6PK18 319 aa10.53□□□□□ -0.72
PFDN1-204ENST00000512707 RGS9BPQ6ZS82 235 aa10.53□□□□□ -0.72
PFDN1-204ENST00000512707 ZCCHC23Q6ZST2 131 aa10.53□□□□□ -0.72
PFDN1-204ENST00000512707 FRMD7Q6ZUT3 714 aa10.53□□□□□ -0.72
PFDN1-204ENST00000512707 AMIGO1Q86WK6 493 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms