RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 TRIM64BA6NI03 449 aa10.26□□□□□ -0.77
SNF8-207ENST00000509995 ZGLP1P0C6A0 271 aa10.26□□□□□ -0.77
SNF8-207ENST00000509995 PIRTP0C851 137 aa10.26□□□□□ -0.77
SNF8-207ENST00000509995 CD46P15529 392 aa10.26□□□□□ -0.77
SNF8-207ENST00000509995 PEX19P40855 299 aa10.26□□□□□ -0.77
SNF8-207ENST00000509995 NSFP46459 744 aaKnown RBP10.26□□□□□ -0.77
SNF8-207ENST00000509995 CDR2Q01850 454 aa10.26□□□□□ -0.77
SNF8-207ENST00000509995 OGDHQ02218 1023 aa10.26□□□□□ -0.77
SNF8-207ENST00000509995 OR1C1Q15619 314 aa10.26□□□□□ -0.77
SNF8-207ENST00000509995 FBXW10Q5XX13 1052 aa10.26□□□□□ -0.77
SNF8-207ENST00000509995 ISM2Q6H9L7 571 aa10.26□□□□□ -0.77
SNF8-207ENST00000509995 DPY19L2P1Q6NXN4 242 aa10.26□□□□□ -0.77
SNF8-207ENST00000509995 DNAJC24Q6P3W2 148 aa10.26□□□□□ -0.77
SNF8-207ENST00000509995 CYP4V2Q6ZWL3 525 aaPredicted RBP10.26□□□□□ -0.77
SNF8-207ENST00000509995 GALNTL5Q7Z4T8 443 aa10.26□□□□□ -0.77
SNF8-207ENST00000509995 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.26□□□□□ -0.77
SNF8-207ENST00000509995 TMTC1Q8IUR5 882 aa10.26□□□□□ -0.77
SNF8-207ENST00000509995 MIEF2Q96C03 454 aa10.26□□□□□ -0.77
SNF8-207ENST00000509995 RBM41Q96IZ5 413 aaKnown RBP10.26□□□□□ -0.77
SNF8-207ENST00000509995 ADGRE3Q9BY15 652 aa10.26□□□□□ -0.77
SNF8-207ENST00000509995 XPO4Q9C0E2 1151 aaKnown RBP10.26□□□□□ -0.77
SNF8-207ENST00000509995 XKR8Q9H6D3 395 aa10.26□□□□□ -0.77
SNF8-207ENST00000509995 ZWILCHQ9H900 591 aa10.26□□□□□ -0.77
SNF8-207ENST00000509995 CUTCQ9NTM9 273 aa10.26□□□□□ -0.77
SNF8-207ENST00000509995 EURLQ9NYK6 297 aa10.26□□□□□ -0.77
SNF8-207ENST00000509995 PCSK1NQ9UHG2 260 aa10.26□□□□□ -0.77
SNF8-207ENST00000509995 ZNF711Q9Y462 761 aa10.26□□□□□ -0.77
SNF8-207ENST00000509995 PKD1L1Q8TDX9 2849 aa10.26□□□□□ -0.77
SNF8-207ENST00000509995 A0A0J9YY10 115 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 USP27XA6NNY8 438 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 F8VZ95 297 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 RASGRF2O14827 1237 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 PHF1O43189 567 aaPredicted RBP10.25□□□□□ -0.77
SNF8-207ENST00000509995 GPR39O43194 453 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 KCNAB3O43448 404 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 CALB1P05937 261 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 CHRNB2P17787 502 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 CXCR2P25025 360 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 SERPINB6P35237 376 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 OCA2Q04671 838 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 NIPAL4Q0D2K0 466 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 LDLRAP1Q5SW96 308 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 FNBP1LQ5T0N5 605 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 YOD1Q5VVQ6 348 aaPredicted RBP10.25□□□□□ -0.77
SNF8-207ENST00000509995 SPINK14Q6IE38 97 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 SARM1Q6SZW1 724 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 CAPN12Q6ZSI9 719 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 MCATQ8IVS2 390 aaKnown RBP10.25□□□□□ -0.77
SNF8-207ENST00000509995 DTWD1Q8N5C7 304 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 AMER2Q8N7J2 671 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 DDHD1Q8NEL9 900 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 OR2L2Q8NH16 312 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 FAM222BQ8WU58 562 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 OR2A14Q96R47 310 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 GPR63Q9BZJ6 419 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 SLC6A16Q9GZN6 736 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 ANKRD10Q9NXR5 420 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 IL1RAPL1Q9NZN1 696 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 ZNF282Q9UDV7 671 aaPredicted RBP10.25□□□□□ -0.77
SNF8-207ENST00000509995 MAU2Q9Y6X3 613 aa10.25□□□□□ -0.77
SNF8-207ENST00000509995 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.25□□□□□ -0.771e-9■■■■□ 20.9
SNF8-207ENST00000509995 KLHL33A6NCF5 533 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 RCCD1A6NED2 376 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 HLA-DQB2P05538 268 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 POLBP06746 335 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 ICAM2P13598 275 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 BMP7P18075 431 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 AMPD1P23109 780 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 ZNF165P49910 485 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 DAZAP2Q15038 168 aaPredicted RBP10.24□□□□□ -0.77
SNF8-207ENST00000509995 ACER2Q5QJU3 275 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 KDELC1Q6UW63 502 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 PRSS57Q6UWY2 283 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 ARHGEF18Q6ZSZ5 1173 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 MON1BQ7L1V2 547 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 LAPTM4BQ86VI4 370 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 PHF13Q86YI8 300 aaPredicted RBP10.24□□□□□ -0.77
SNF8-207ENST00000509995 PSTKQ8IV42 348 aaKnown RBP10.24□□□□□ -0.77
SNF8-207ENST00000509995 ULK2Q8IYT8 1036 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 LRRC75A-AS1Q8N1F1 130 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 LILRA3Q8N6C8 439 aaPredicted RBP10.24□□□□□ -0.77
SNF8-207ENST00000509995 FLVCR1-AS1Q8TAF5 88 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 MAML1Q92585 1016 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 ZNF592Q92610 1267 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 FERD3LQ96RJ6 166 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 UTP23Q9BRU9 249 aaKnown RBP10.24□□□□□ -0.77
SNF8-207ENST00000509995 CCM2Q9BSQ5 444 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 HGH1Q9BTY7 390 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 MAGEE1Q9HCI5 957 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 HAUS2Q9NVX0 235 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 AMACRQ9UHK6 382 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 ALG6Q9Y672 507 aa10.24□□□□□ -0.77
SNF8-207ENST00000509995 IGLV3-12A0A075B6K2 115 aa10.23□□□□□ -0.77
SNF8-207ENST00000509995 H3BRJ5 948 aa10.23□□□□□ -0.77
SNF8-207ENST00000509995 FGFR1OPO95684 399 aaKnown RBP10.23□□□□□ -0.77
SNF8-207ENST00000509995 MMP2P08253 660 aa10.23□□□□□ -0.77
SNF8-207ENST00000509995 UGT1A1P22309 533 aa10.23□□□□□ -0.77
SNF8-207ENST00000509995 MCM3P25205 808 aa10.23□□□□□ -0.77
SNF8-207ENST00000509995 CD96P40200 585 aa10.23□□□□□ -0.77
SNF8-207ENST00000509995 CD86P42081 329 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms