RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 HCRTR1O43613 425 aa15.57■□□□□ 0.08
PDLIM5-212ENST00000509333 CARSP49589 748 aaKnown RBP15.57■□□□□ 0.08
PDLIM5-212ENST00000509333 SLC5A12Q1EHB4 618 aa15.57■□□□□ 0.08
PDLIM5-212ENST00000509333 TEDDM1Q5T9Z0 273 aa15.57■□□□□ 0.08
PDLIM5-212ENST00000509333 NEK10Q6ZWH5 1172 aa15.57■□□□□ 0.08
PDLIM5-212ENST00000509333 MAATS1Q7Z4T9 603 aa15.57■□□□□ 0.08
PDLIM5-212ENST00000509333 CNTN4Q8IWV2 1026 aa15.57■□□□□ 0.08
PDLIM5-212ENST00000509333 FAM20CQ8IXL6 584 aa15.57■□□□□ 0.08
PDLIM5-212ENST00000509333 DNAJC22Q8N4W6 341 aa15.57■□□□□ 0.08
PDLIM5-212ENST00000509333 GIMAP7Q8NHV1 300 aa15.57■□□□□ 0.08
PDLIM5-212ENST00000509333 HMGCLL1Q8TB92 370 aa15.57■□□□□ 0.08
PDLIM5-212ENST00000509333 SKA2Q8WVK7 121 aaPredicted RBP15.57■□□□□ 0.08
PDLIM5-212ENST00000509333 KCNJ9Q92806 393 aa15.57■□□□□ 0.08
PDLIM5-212ENST00000509333 FAM167BQ9BTA0 163 aa15.57■□□□□ 0.08
PDLIM5-212ENST00000509333 AARSD1Q9BTE6 412 aaKnown RBP15.57■□□□□ 0.08
PDLIM5-212ENST00000509333 LHX9Q9NQ69 397 aa15.57■□□□□ 0.08
PDLIM5-212ENST00000509333 ZC3H7BQ9UGR2 993 aaKnown RBP15.57■□□□□ 0.08
PDLIM5-212ENST00000509333 SLC39A10Q9ULF5 831 aa15.57■□□□□ 0.08
PDLIM5-212ENST00000509333 MRFAP1Q9Y605 127 aa15.57■□□□□ 0.08
PDLIM5-212ENST00000509333 COMMD10Q9Y6G5 202 aa15.57■□□□□ 0.08
PDLIM5-212ENST00000509333 ATMQ13315 3056 aa15.57■□□□□ 0.08
PDLIM5-212ENST00000509333 A0A0J9YY10 115 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 E5RI56 91 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 E7ESA3 106 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 H3BMH7 237 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 GFYI3L273 518 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 PSIP1O75475 530 aaKnown RBP15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 SCRG1O75711 98 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 ITGB2P05107 769 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 TCN2P20062 427 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 DLSTP36957 453 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 CCNFP41002 786 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 ARL4CP56559 192 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 FRG1Q14331 258 aaKnown RBP15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 TBR1Q16650 682 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 HIF1AQ16665 826 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 CYP2A13Q16696 494 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 STEAP4Q687X5 459 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 DUPD1Q68J44 220 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 FAM199XQ6PEV8 388 aaPredicted RBP15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 TRMT10BQ6PF06 316 aaKnown RBP15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 ZNF517Q6ZMY9 492 aaPredicted RBP15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 MAGEC3Q8TD91 643 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 DENND1AQ8TEH3 1009 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 ASB11Q8WXH4 323 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 KIAA1143Q96AT1 154 aaPredicted RBP15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 SLC22A18Q96BI1 424 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 LRFN5Q96NI6 719 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 GPR21Q99679 349 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 SPRTNQ9H040 489 aaPredicted RBP15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 CCDC68Q9H2F9 335 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 MOCS1Q9NZB8 636 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 KLHL20Q9Y2M5 609 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 PCDHB3Q9Y5E6 796 aa15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 SMG1Q96Q15 3661 aaKnown RBP15.56■□□□□ 0.08
PDLIM5-212ENST00000509333 KRT87PA6NCN2 255 aa15.55■□□□□ 0.08
PDLIM5-212ENST00000509333 TMEM150CB9EJG8 249 aa15.55■□□□□ 0.08
PDLIM5-212ENST00000509333 RAD51CO43502 376 aa15.55■□□□□ 0.08
PDLIM5-212ENST00000509333 SKIV2L2P42285 1042 aaKnown RBP15.55■□□□□ 0.08
PDLIM5-212ENST00000509333 BDKRB1P46663 353 aa15.55■□□□□ 0.08
PDLIM5-212ENST00000509333 SF1Q15637 639 aaKnown RBP15.55■□□□□ 0.08
PDLIM5-212ENST00000509333 CRTC2Q53ET0 693 aaPredicted RBP15.55■□□□□ 0.08
PDLIM5-212ENST00000509333 TAF1BQ53T94 588 aaPredicted RBP15.55■□□□□ 0.08
PDLIM5-212ENST00000509333 KIAA0408Q6ZU52 694 aa15.55■□□□□ 0.08
PDLIM5-212ENST00000509333 GALNT7Q86SF2 657 aa15.55■□□□□ 0.08
PDLIM5-212ENST00000509333 EXD3Q8N9H8 876 aa15.55■□□□□ 0.08
PDLIM5-212ENST00000509333 C19orf47Q8N9M1 422 aaKnown RBP15.55■□□□□ 0.08
PDLIM5-212ENST00000509333 BBOF1Q8ND07 529 aa15.55■□□□□ 0.08
PDLIM5-212ENST00000509333 OR9A1PQ8NGU1 263 aa15.55■□□□□ 0.08
PDLIM5-212ENST00000509333 EXTL1Q92935 676 aa15.55■□□□□ 0.08
PDLIM5-212ENST00000509333 CERS2Q96G23 380 aa15.55■□□□□ 0.08
PDLIM5-212ENST00000509333 WHRNQ9P202 907 aa15.55■□□□□ 0.08
PDLIM5-212ENST00000509333 CROTQ9UKG9 612 aa15.55■□□□□ 0.08
PDLIM5-212ENST00000509333 CHMP2BQ9UQN3 213 aa15.55■□□□□ 0.08
PDLIM5-212ENST00000509333 PCDHGA6Q9Y5G7 932 aa15.55■□□□□ 0.08
PDLIM5-212ENST00000509333 PCM1Q15154 2024 aa15.55■□□□□ 0.08
PDLIM5-212ENST00000509333 A0A1W2PPV9 198 aa15.54■□□□□ 0.08
PDLIM5-212ENST00000509333 ZNF891A8MT65 544 aaPredicted RBP15.54■□□□□ 0.08
PDLIM5-212ENST00000509333 ARHGEF33A8MVX0 844 aa15.54■□□□□ 0.08
PDLIM5-212ENST00000509333 MEN1O00255 615 aa15.54■□□□□ 0.08
PDLIM5-212ENST00000509333 SNRNP200O75643 2136 aaKnown RBP15.54■□□□□ 0.08
PDLIM5-212ENST00000509333 RECKO95980 971 aa15.54■□□□□ 0.08
PDLIM5-212ENST00000509333 CTSBP07858 339 aa15.54■□□□□ 0.08
PDLIM5-212ENST00000509333 MPC1LP0DKB6 136 aa15.54■□□□□ 0.08
PDLIM5-212ENST00000509333 C2orf54Q08AI8 447 aa15.54■□□□□ 0.08
PDLIM5-212ENST00000509333 PDIA2Q13087 525 aaKnown RBP15.54■□□□□ 0.08
PDLIM5-212ENST00000509333 GPS2Q13227 327 aa15.54■□□□□ 0.08
PDLIM5-212ENST00000509333 FASTKQ14296 549 aaKnown RBP15.54■□□□□ 0.08
PDLIM5-212ENST00000509333 TTLL9Q3SXZ7 439 aa15.54■□□□□ 0.08
PDLIM5-212ENST00000509333 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.54■□□□□ 0.08
PDLIM5-212ENST00000509333 FCRL6Q6DN72 434 aa15.54■□□□□ 0.08
PDLIM5-212ENST00000509333 LCN10Q6JVE6 187 aa15.54■□□□□ 0.08
PDLIM5-212ENST00000509333 FIGLAQ6QHK4 219 aa15.54■□□□□ 0.08
PDLIM5-212ENST00000509333 ZNF572Q7Z3I7 529 aaPredicted RBP15.54■□□□□ 0.08
PDLIM5-212ENST00000509333 TMEM126BQ8IUX1 230 aa15.54■□□□□ 0.08
PDLIM5-212ENST00000509333 ANKMY2Q8IV38 441 aa15.54■□□□□ 0.08
PDLIM5-212ENST00000509333 FBXO15Q8NCQ5 510 aaPredicted RBP15.54■□□□□ 0.08
PDLIM5-212ENST00000509333 OR2A1Q8NGT9 310 aa15.54■□□□□ 0.08
PDLIM5-212ENST00000509333 CD200R1Q8TD46 325 aa15.54■□□□□ 0.08
PDLIM5-212ENST00000509333 CT55Q8WUE5 264 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms