RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 SLC12A1Q13621 1099 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 LARS2Q15031 903 aaKnown RBP3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 HLA-BQ31612 363 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 TTC31Q49AM3 519 aaPredicted RBP3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 RABGAP1LQ5R372 815 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 TAF3Q5VWG9 929 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 ZNF776Q68DI1 518 aaPredicted RBP3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 TRNP1Q6NT89 227 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 SARM1Q6SZW1 724 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 BNIPLQ7Z465 357 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 ERICH1Q86X53 443 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 KRT73Q86Y46 540 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 PHF13Q86YI8 300 aaPredicted RBP3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 CNGA4Q8IV77 575 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 MMAAQ8IVH4 418 aaKnown RBP3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 ZNF683Q8IZ20 524 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 CCAR2Q8N163 923 aaKnown RBP3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 HDDC3Q8N4P3 179 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 ZCCHC9Q8N567 271 aaKnown RBP3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 ATP6V0D2Q8N8Y2 350 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 TMEM35BQ8NCS4 154 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 OR52K2Q8NGK3 314 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 CENPIQ92674 756 aaPredicted RBP3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 BIRC7Q96CA5 298 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 ALG14Q96F25 216 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 PGAP3Q96FM1 320 aaPredicted RBP3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 VCPIP1Q96JH7 1222 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 C1orf74Q96LT6 269 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 RPRD1AQ96P16 312 aaPredicted RBP3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 NPY6RQ99463 290 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 PRPF18Q99633 342 aaKnown RBP3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 AGPAT1Q99943 283 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 FEM1AQ9BSK4 669 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 CRB3Q9BUF7 120 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 CINPQ9BW66 212 aaPredicted RBP3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 ADGRE3Q9BY15 652 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 XPO4Q9C0E2 1151 aaKnown RBP3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 TKTL2Q9H0I9 626 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 ZNF700Q9H0M5 742 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 NEUROG2Q9H2A3 272 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 PABPC3Q9H361 631 aaKnown RBP3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 SLC32A1Q9H598 525 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 SYNCQ9H7C4 482 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 IL21RQ9HBE5 538 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 SGK2Q9HBY8 427 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 OBP2BQ9NPH6 170 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 TM7SF3Q9NS93 570 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 PIGVQ9NUD9 493 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 DDIT4Q9NX09 232 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 ARHGEF38Q9NXL2 777 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 RRN3Q9NYV6 651 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 COX16Q9P0S2 106 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 IFNKQ9P0W0 207 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 SLC12A6Q9UHW9 1150 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 TAGLN3Q9UI15 199 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 SLCO3A1Q9UIG8 710 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 VANGL2Q9ULK5 521 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 FZD4Q9ULV1 537 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 SCML1Q9UN30 329 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 NCKAP1Q9Y2A7 1128 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 DTNAQ9Y4J8 743 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 OR51B4Q9Y5P0 310 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 BZW2Q9Y6E2 419 aaKnown RBP3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 SLCO1B1Q9Y6L6 691 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 ABCA7Q8IZY2 2146 aa3.53□□□□□ -1.84
UBE2D3-226ENST00000508635 CACNA1AO00555 2505 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 SPAG17Q6Q759 2223 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 PI4KAP42356 2102 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 SPTBN4Q9H254 2564 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 IGLV3-10A0A075B6K4 115 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 A0A1B0GVM2 712 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 A0A1B0GVT2 93 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 FAM170AA1A519 330 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 OR2W5A6NFC9 320 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 CGB1A6NKQ9 187 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 SIGLEC16A6NMB1 481 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 PCDH17O14917 1159 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 MCF2LO15068 1137 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 MID1O15344 667 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 ASNA1O43681 348 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 SH3BP5O60239 455 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 RNASEH1O60930 286 aaKnown RBP3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 CLDN11O75508 207 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 RNASEH2AO75792 299 aaKnown RBP3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 CNTN5O94779 1100 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 TNFRSF6BO95407 300 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 TOP3BO95985 862 aaKnown RBP3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 F9P00740 461 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 MBPP02686 304 aaPredicted RBP3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 GYPCP04921 128 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 CHRM5P08912 532 aaPredicted RBP3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 CCDC172P0C7W6 258 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 ZNF883P0CG24 379 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 PEPDP12955 493 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 PDGFRAP16234 1089 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 FERP16591 822 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 GOT1P17174 413 aa3.52□□□□□ -1.85
UBE2D3-226ENST00000508635 EPHB2P29323 1055 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms