RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 IL6P05231 212 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 HAPLN1P10915 354 aaPredicted RBP16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 C21orf33P30042 268 aaPredicted RBP16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 SLC15A1P46059 708 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 BCL7AQ4VC05 210 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 SPANXN2Q5MJ10 180 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 SNAP47Q5SQN1 464 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 C9orf131Q5VYM1 1079 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 ENTHD1Q8IYW4 607 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 PGBD5Q8N414 524 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 GLB1L3Q8NCI6 653 aaPredicted RBP16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 BRSK1Q8TDC3 778 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 HCAR2Q8TDS4 363 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 SP110Q9HB58 689 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 IL1RAPQ9NPH3 570 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 CD274Q9NZQ7 290 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 RIMKLBQ9ULI2 386 aa16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 TIMM13Q9Y5L4 95 aaPredicted RBP16.71■□□□□ 0.27
SQSTM1-211ENST00000506690 ABCB1P08183 1280 aaPredicted RBP16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 FPR1P21462 350 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 DNAJA1P31689 397 aaKnown RBP16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 UGT2B15P54855 530 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 NRG1Q02297 640 aaPredicted RBP16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 ELP6Q0PNE2 266 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 GTF2H3Q13889 308 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 TAPT1Q6NXT6 567 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 MSANTD2Q6P1R3 559 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 MOB2Q70IA6 237 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 TMEM86AQ8N2M4 240 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 PSD4Q8NDX1 1056 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 CDKN2AIPNLQ96HQ2 116 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 PPP3R2Q96LZ3 170 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 MYOCQ99972 504 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 CLPBQ9H078 707 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 RNF167Q9H6Y7 350 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 ZFP14Q9HCL3 533 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 TXNRD2Q9NNW7 524 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 TAS2R9Q9NYW1 312 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 MICAL3Q7RTP6 2002 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 GOLGA8CPA6NN73 597 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 PTGESO14684 152 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 DNTTP04053 509 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 SLC2A4P14672 509 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 RPL38P63173 70 aaKnown RBP16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 RPP38P78345 283 aaKnown RBP16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 SOWAHCQ53LP3 525 aaPredicted RBP16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 NRARPQ7Z6K4 114 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 FAM120BQ96EK7 910 aaKnown RBP16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 RNF170Q96K19 258 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 OR2A14Q96R47 310 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 CPPED1Q9BRF8 314 aaPredicted RBP16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 TRIM62Q9BVG3 475 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 PDP1Q9P0J1 537 aaPredicted RBP16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 CACNG4Q9UBN1 327 aa16.7■□□□□ 0.26
SQSTM1-211ENST00000506690 OR7A17O14581 309 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 FGF1P05230 155 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 HLA-DPA1P20036 260 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 PIK3CBP42338 1070 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 P2RX3P56373 397 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 C19orf57Q0VDD7 668 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 OR4F6Q8NGB9 312 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 ANGPTL6Q8NI99 470 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 EMID1Q96A84 441 aaPredicted RBP16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 OR51E2Q9H255 320 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 CLMPQ9H6B4 373 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 PLSCR3Q9NRY6 295 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 KRT84Q9NSB2 600 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 C14orf119Q9NWQ9 140 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 PAQR5Q9NXK6 330 aaPredicted RBP16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 PSORS1C1Q9UIG5 152 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 TRAPPC4Q9Y296 219 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 BTBD3Q9Y2F9 522 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 LOC100506127A0A0U1RQW1 187 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 MYO1GB0I1T2 1018 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 PER2O15055 1255 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 GJB3O75712 270 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 FKBP9O95302 570 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 CRYZL1O95825 349 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 CNPP09543 421 aaKnown RBP16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 ARL1P40616 181 aaPredicted RBP16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 CDC42EP1Q00587 391 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 NPRL3Q12980 569 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 DDR2Q16832 855 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 ZNF517Q6ZMY9 492 aaPredicted RBP16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 GRPEL2Q8TAA5 225 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 SETD6Q8TBK2 473 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 TRIM63Q969Q1 353 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 PSMG2Q969U7 264 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 MYLPFQ96A32 169 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 DMRTB1Q96MA1 342 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 Q96MT0 163 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 CENPOQ9BU64 300 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 DPY30Q9C005 99 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 PLCXD1Q9NUJ7 323 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 SAMD4AQ9UPU9 718 aaKnown RBP16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 IPPQ9Y573 584 aa16.69■□□□□ 0.26
SQSTM1-211ENST00000506690 MOCS2O96007 188 aaPredicted RBP16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 PIRTP0C851 137 aa16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 MLLT6P55198 1093 aaPredicted RBP16.68■□□□□ 0.26
SQSTM1-211ENST00000506690 YIF1BQ5BJH7 314 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms