RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 AZGP1P25311 298 aaKnown RBP3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 SSTR2P30874 369 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 CORO1AP31146 461 aaKnown RBP3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 TROAPQ12815 778 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 COASYQ13057 564 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 RRS1Q15050 365 aaKnown RBP3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 C2orf76Q3KRA6 126 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 KRTAP15-1Q3LI76 137 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 TMEM35AQ53FP2 167 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 RAB6CQ53S08 254 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 XKR9Q5GH70 373 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 PRR27Q6MZM9 219 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 TRNP1Q6NT89 227 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 MFSD12Q6NUT3 480 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 GBP6Q6ZN66 633 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 TMPRSS11FQ6ZWK6 438 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 SMIM5Q71RC9 77 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 C4orf19Q8IY42 314 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 RNF113BQ8IZP6 322 aaKnown RBP3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 SYCP3Q8IZU3 236 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 NEXN-AS1Q8NBZ9 246 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 OCC1Q8TAD7 63 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 SMPDL3BQ92485 455 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 DNASE1L2Q92874 299 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 RPL36ALQ969Q0 106 aaKnown RBP3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 MOB3AQ96BX8 217 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 OTUB1Q96FW1 271 aaPredicted RBP3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 C3orf30Q96M34 536 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 ZNF582Q96NG8 517 aaPredicted RBP3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 PCYT2Q99447 389 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 CPNE1Q99829 537 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 UTP14AQ9BVJ6 771 aaKnown RBP3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 SF3B5Q9BWJ5 86 aaKnown RBP3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 GTPBP2Q9BX10 602 aaKnown RBP3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 SPRTNQ9H040 489 aaPredicted RBP3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 RAB6CQ9H0N0 254 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 EBF3Q9H4W6 596 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 SLA2Q9H6Q3 261 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 TCP11L1Q9NUJ3 509 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 CWC25Q9NXE8 425 aaPredicted RBP3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 C1RLQ9NZP8 487 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 VPS18Q9P253 973 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 PTGFRNQ9P2B2 879 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 ITGA11Q9UKX5 1188 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 ABT1Q9ULW3 272 aaKnown RBP3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 PCDHAC2Q9Y5I4 1007 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 INSL5Q9Y5Q6 135 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 TNFRSF18Q9Y5U5 241 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 TTC21AQ8NDW8 1320 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 NSD2O96028 1365 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 CCDC7Q96M83 1385 aa3.1□□□□□ -1.91
TRAPPC11-205ENST00000506426 NHSQ6T4R5 1651 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 FEZF1A0PJY2 475 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 OR5K3A6NET4 321 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 NEMP2A6NFY4 417 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 LILRA5A6NI73 299 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 FAM86B1E9PN63 330 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 SLC33A1O00400 549 aaPredicted RBP3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 SLC30A4O14863 429 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 GPR137BO60478 399 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 KCNJ13O60928 360 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 CLDN14O95500 239 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 GLUD1P00367 558 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 RLN1P04808 185 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 FAM86B2P0C5J1 330 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 PLA2G4BP0C869 781 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 SAGP10523 405 aaPredicted RBP3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 TGFB3P10600 412 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 PSG1P11464 419 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 STMN1P16949 149 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 CYP11B2P19099 503 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 HLA-DPA1P20036 260 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 PTPN3P26045 913 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 TMPOP42166 694 aaKnown RBP3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 PSMC4P43686 418 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 LHX1P48742 406 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 GLUD2P49448 558 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 PEX5P50542 639 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 STX1BP61266 288 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 Q0VFX4 171 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 ZNF155Q12901 538 aaPredicted RBP3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 DHX34Q14147 1143 aaKnown RBP3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 RCN2Q14257 317 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 TWIST1Q15672 202 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 CALCRLQ16602 461 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 SPOUT1Q5T280 376 aaKnown RBP3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 C8orf82Q6P1X6 216 aaPredicted RBP3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 PLBD1Q6P4A8 553 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 ZNF449Q6P9G9 518 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 ENPP7Q6UWV6 458 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 ZNF704Q6ZNC4 412 aaPredicted RBP3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 C15orf39Q6ZRI6 1047 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 Q75L30 129 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 DSG4Q86SJ6 1040 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 PHLDB2Q86SQ0 1253 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 FJX1Q86VR8 437 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 FAM219AQ8IW50 185 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 SRRM1Q8IYB3 904 aaKnown RBP3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 PGBD5Q8N414 524 aa3.09□□□□□ -1.91
TRAPPC11-205ENST00000506426 GBGT1Q8N5D6 347 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms