RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 OR52J3Q8NH60 311 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 SPPL3Q8TCT6 385 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 SLC47A1Q96FL8 570 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 DGCR6LQ9BY27 220 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 DDX18Q9NVP1 670 aaKnown RBP13.76□□□□□ -0.21
TCOF1-207ENST00000504761 TEKT2Q9UIF3 430 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 LINC01553A4QN01 128 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 SOX9P48436 509 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 SPANXN4Q5MJ08 99 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 AP1ARQ63HQ0 302 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 CEP68Q76N32 757 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 SPNS2Q8IVW8 549 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 STX19Q8N4C7 294 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 AADATQ8N5Z0 425 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 SLC2A11Q9BYW1 496 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 BRINP2Q9C0B6 783 aa13.76□□□□□ -0.21
TCOF1-207ENST00000504761 LOC285095A0A1B0GVY8 99 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 A0A1W2PQU0 124 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 FAM234BA2RU67 622 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 MANBAO00462 879 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 ACTR3P61158 418 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 TCEAL5Q5H9L2 206 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 GATAD2AQ86YP4 633 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 OR10Q1Q8NGQ4 319 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 SLC9A6Q92581 669 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 LRRC58Q96CX6 371 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 ANKRD27Q96NW4 1050 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 DHRS4Q9BTZ2 278 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 DUSP26Q9BV47 211 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 ZBP1Q9H171 429 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 RC3H2Q9HBD1 1191 aaKnown RBP13.75□□□□□ -0.21
TCOF1-207ENST00000504761 MRPS30Q9NP92 439 aaKnown RBP13.75□□□□□ -0.21
TCOF1-207ENST00000504761 ZDHHC7Q9NXF8 308 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 OR1A2Q9Y585 309 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 DOCK5Q9H7D0 1870 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 CCDC189A1A4V9 331 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 PPP6CO00743 305 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 KLK1P06870 262 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 CD72P21854 359 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 NOS3P29474 1203 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 MTHFRP42898 656 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 DNAJB13P59910 316 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 SH3BP2P78314 561 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 SLC7A9P82251 487 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 TMEM214Q6NUQ4 689 aaKnown RBP13.75□□□□□ -0.21
TCOF1-207ENST00000504761 GALNT5Q7Z7M9 940 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 CBR4Q8N4T8 237 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 PAK6Q9NQU5 681 aaPredicted RBP13.75□□□□□ -0.21
TCOF1-207ENST00000504761 TREX1Q9NSU2 369 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 MKS1Q9NXB0 559 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 NKX1-2Q9UD57 310 aaPredicted RBP13.75□□□□□ -0.21
TCOF1-207ENST00000504761 MAFFQ9ULX9 164 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 MAGEB17A8MXT2 336 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 GABRB3P28472 473 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 GRIA2P42262 883 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 SPIBQ01892 262 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 PRKCQQ04759 706 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 ZNF542PQ5EBM4 170 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 KCTD11Q693B1 232 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 ANKRD26P1Q6NSI1 321 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 KIAA2013Q8IYS2 634 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 TMCO5AQ8N6Q1 288 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 FAM47BQ8NA70 645 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 JPH3Q8WXH2 748 aaPredicted RBP13.75□□□□□ -0.21
TCOF1-207ENST00000504761 ROPN1LQ96C74 230 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 WDR83Q9BRX9 315 aaKnown RBP13.75□□□□□ -0.21
TCOF1-207ENST00000504761 TMEM245Q9H330 911 aa13.75□□□□□ -0.21
TCOF1-207ENST00000504761 NOL6Q9H6R4 1146 aaKnown RBP13.75□□□□□ -0.21
TCOF1-207ENST00000504761 A0A0J9YVX5 310 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 B4DGG1 531 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 I6L893 689 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-207ENST00000504761 STX16O14662 325 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 IL6P05231 212 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 ATXN1LP0C7T5 689 aaKnown RBP13.74□□□□□ -0.21
TCOF1-207ENST00000504761 CKMT2P17540 419 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 EIF4HQ15056 248 aaKnown RBP13.74□□□□□ -0.21
TCOF1-207ENST00000504761 C6orf136Q5SQH8 315 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 C6orf52Q5T4I8 152 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 CCSAPQ6IQ19 270 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-207ENST00000504761 TNFAIP8L2Q6P589 184 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-207ENST00000504761 BHLHB9Q6PI77 547 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 OR5AK3PQ8NH89 298 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 HIC2Q96JB3 615 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 CBSLP0DN79 551 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 CBSP35520 551 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 CASP12Q6UXS9 341 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 PROSER1Q86XN7 944 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 CLVS1Q8IUQ0 354 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-207ENST00000504761 TBC1D21Q8IYX1 336 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 RHEBL1Q8TAI7 183 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 CANT1Q8WVQ1 401 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 FUBP1Q96AE4 644 aaKnown RBP13.74□□□□□ -0.21
TCOF1-207ENST00000504761 EFCAB11Q9BUY7 163 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 ZNF232Q9UNY5 417 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 H7BY64 318 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 hCG_2039718K7EN88 272 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 WFS1O76024 890 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 ALDH4A1P30038 563 aa13.74□□□□□ -0.21
TCOF1-207ENST00000504761 SIM2Q14190 667 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-207ENST00000504761 AMZ1Q400G9 498 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms