RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 BECN1Q14457 450 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 ATP13A4Q4VNC1 1196 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 LDLRAP1Q5SW96 308 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 ACAD10Q6JQN1 1059 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 C16orf47Q6ZP98 133 aaPredicted RBP11.94□□□□□ -0.5
LSM6-204ENST00000504181 RIPOR1Q6ZS17 1223 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 POLNQ7Z5Q5 900 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 PHC3Q8NDX5 983 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 SIMC1Q8NDZ2 872 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 ARMC2Q8NEN0 867 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 FAM57AQ8TBR7 257 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 STT3BQ8TCJ2 826 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 LRRN4Q8WUT4 740 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 MAML1Q92585 1016 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 MIEF2Q96C03 454 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 SEC16BQ96JE7 1060 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 CSPG4P5Q96PW8 444 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 OR2A14Q96R47 310 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 HGH1Q9BTY7 390 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 TFB2MQ9H5Q4 396 aaKnown RBP11.94□□□□□ -0.5
LSM6-204ENST00000504181 UGT1A7Q9HAW7 530 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 UGT1A10Q9HAW8 530 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 UGT1A8Q9HAW9 530 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 MAGEE1Q9HCI5 957 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 DMRT3Q9NQL9 472 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 CUTCQ9NTM9 273 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 EURLQ9NYK6 297 aa11.94□□□□□ -0.5
LSM6-204ENST00000504181 A0A0J9YY10 115 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 IDSB3KWA1 339 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 SNPHO15079 494 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 MATN3O15232 486 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 RNF8O76064 485 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 ZGLP1P0C6A0 271 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 MCM3P25205 808 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 AKT1P31749 480 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 PTGS2P35354 604 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 FANCCQ00597 558 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 PRKG2Q13237 762 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 MAN2A1Q16706 1144 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 GPRC6AQ5T6X5 926 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 SHEQ5VZ18 495 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 FCRLBQ6BAA4 426 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 SARM1Q6SZW1 724 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 ARSKQ6UWY0 536 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.93□□□□□ -0.5
LSM6-204ENST00000504181 NT5DC3Q86UY8 548 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 PSTKQ8IV42 348 aaKnown RBP11.93□□□□□ -0.5
LSM6-204ENST00000504181 CFAP206Q8IYR0 622 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 VWA5B2Q8N398 1253 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 MDS2Q8NDY4 140 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 DDHD1Q8NEL9 900 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 MYRIPQ8NFW9 859 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 DENND1AQ8TEH3 1009 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 HSPH1Q92598 858 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 CHRNA10Q9GZZ6 450 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 NDST4Q9H3R1 872 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 RIC8BQ9NVN3 520 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 HAUS2Q9NVX0 235 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 ANKRD10Q9NXR5 420 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 SPHK1Q9NYA1 384 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 TRPS1Q9UHF7 1281 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 GNPTGQ9UJJ9 305 aa11.93□□□□□ -0.5
LSM6-204ENST00000504181 A6NNC1 897 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 PES1O00541 588 aaKnown RBP11.92□□□□□ -0.5
LSM6-204ENST00000504181 MFSD11O43934 449 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 HSP90AA1P07900 732 aaKnown RBP11.92□□□□□ -0.5
LSM6-204ENST00000504181 PRKCSHP14314 528 aaPredicted RBP11.92□□□□□ -0.5
LSM6-204ENST00000504181 MSH3P20585 1137 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 CXCR2P25025 360 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 KIR2DL3P43628 341 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 NUP107P57740 925 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 OCA2Q04671 838 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 TUBA3CQ13748 450 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 SYCP1Q15431 976 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 PPP2R5EQ16537 467 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 DPYSL2Q16555 572 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 LONRF2Q1L5Z9 754 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 RNFT1Q5M7Z0 435 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 FAM182AQ5T1J6 154 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 TIGD7Q6NT04 549 aaPredicted RBP11.92□□□□□ -0.5
LSM6-204ENST00000504181 TUBA3EQ6PEY2 450 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 FAM151BQ6UXP7 276 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 GALNTL5Q7Z4T8 443 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 LAPTM4BQ86VI4 370 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 BEST3Q8N1M1 668 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 FAM98AQ8NCA5 519 aaKnown RBP11.92□□□□□ -0.5
LSM6-204ENST00000504181 SCMH1Q96GD3 660 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 TRIB3Q96RU7 358 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 XPO4Q9C0E2 1151 aaKnown RBP11.92□□□□□ -0.5
LSM6-204ENST00000504181 IL26Q9NPH9 171 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 CRIM1Q9NZV1 1036 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 AMACRQ9UHK6 382 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 TEKT2Q9UIF3 430 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 ICKQ9UPZ9 632 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 SPO11Q9Y5K1 396 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 EML6Q6ZMW3 1958 aa11.92□□□□□ -0.5
LSM6-204ENST00000504181 A0A1B0GTH9 108 aa11.91□□□□□ -0.5
LSM6-204ENST00000504181 A8MUI8 341 aa11.91□□□□□ -0.5
LSM6-204ENST00000504181 CRLF1O75462 422 aa11.91□□□□□ -0.5
LSM6-204ENST00000504181 ZNF24P17028 368 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms