RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 BRI3BPQ8WY22 251 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 KAT2AQ92830 837 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 CDK15Q96Q40 435 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 GKN1Q9NS71 199 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 EURLQ9NYK6 297 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 MRPS17Q9Y2R5 130 aaKnown RBP16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 A0A1W2PRU2 124 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 UNCXA6NJT0 531 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 EI24O14681 340 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 DLX3O60479 287 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 RSL1D1O76021 490 aaKnown RBP16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 SIX3O95343 332 aaPredicted RBP16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 BLKP51451 505 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 MTTPP55157 894 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 GRSF1Q12849 480 aaKnown RBP eCLIP16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 TARDBPQ13148 414 aaKnown RBP eCLIP16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 UFD1Q92890 307 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 CCSER2Q9H7U1 834 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 SPATA7Q9P0W8 599 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 COPS7AQ9UBW8 275 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 PRODHO43272 600 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 AHSGP02765 367 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 MASP1P48740 699 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 KLF1Q13351 362 aaPredicted RBP16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 HFE2Q6ZVN8 426 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 KBTBD7Q8WVZ9 684 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 POLMQ9NP87 494 aaPredicted RBP16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 TVP23BQ9NYZ1 205 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 SCN11AQ9UI33 1791 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 A0A1W2PQ72 361 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 NCBP2P52298 156 aaKnown RBP eCLIP16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 SLBPQ14493 270 aaKnown RBP eCLIP16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 LRRC73Q5JTD7 316 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 TNFAIP8L2Q6P589 184 aaPredicted RBP16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 LYSMD3Q7Z3D4 306 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 OR2AP1Q8NGE2 309 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 EFHD2Q96C19 240 aaPredicted RBP16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 SLC38A3Q99624 504 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 CGREF1Q99674 301 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 TRIM2Q9C040 744 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 POLR2J3Q9H1A7 115 aaKnown RBP16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 J3KR12 359 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 ARVCFO00192 962 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 MTHFD1P11586 935 aaKnown RBP16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 IL12BP29460 328 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 TIE1P35590 1138 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 ABATP80404 500 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 RNASE12Q5GAN4 147 aaKnown RBP16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 XKR4Q5GH76 650 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 GPR153Q6NV75 609 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 USP43Q70EL4 1123 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 OR52B2Q96RD2 323 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 GAS2L1Q99501 681 aaPredicted RBP16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 CNPPD1Q9BV87 410 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 ARPC2O15144 300 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 REM1O75628 298 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 PRAMEF12O95522 483 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 MAT2AP31153 395 aaKnown RBP16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 CBX3Q13185 183 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 E2F2Q14209 437 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 IQCCQ4KMZ1 466 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 RBM48Q5RL73 367 aaKnown RBP16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 FRG2Q64ET8 278 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 MBLAC2Q68D91 279 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 B3GALT6Q96L58 329 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 FRG2BQ96QU4 278 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 RIOK2Q9BVS4 552 aaKnown RBP16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 COMMD4Q9H0A8 199 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 WDR26Q9H7D7 661 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 FLRT1Q9NZU1 646 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 STYXL1Q9Y6J8 313 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 ALPIP09923 528 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 NDUFS1P28331 727 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 SLC13A2Q13183 592 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 AKIRIN2Q53H80 203 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 ARSIQ5FYB1 569 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 IFNL1Q8IU54 200 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 MCEMP1Q8IX19 187 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 CCM2Q9BSQ5 444 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 YTHDF1Q9BYJ9 559 aaKnown RBP16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 TRNAU1APQ9NX07 287 aaKnown RBP16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 TMED5Q9Y3A6 229 aa16.18■□□□□ 0.18
PCDHA1-203ENST00000504120 COL1A1P02452 1464 aaPredicted RBP16.17■□□□□ 0.18
PCDHA1-203ENST00000504120 MTRF1O75570 445 aaKnown RBP16.17■□□□□ 0.18
PCDHA1-203ENST00000504120 NR4A1P22736 598 aa16.17■□□□□ 0.18
PCDHA1-203ENST00000504120 ACADLP28330 430 aa16.17■□□□□ 0.18
PCDHA1-203ENST00000504120 ARHGDIBP52566 201 aa16.17■□□□□ 0.18
PCDHA1-203ENST00000504120 HMGCS1Q01581 520 aa16.17■□□□□ 0.18
PCDHA1-203ENST00000504120 CHRNA6Q15825 494 aa16.17■□□□□ 0.18
PCDHA1-203ENST00000504120 OR10G2Q8NGC3 310 aa16.17■□□□□ 0.18
PCDHA1-203ENST00000504120 GAL3ST4Q96RP7 486 aa16.17■□□□□ 0.18
PCDHA1-203ENST00000504120 IL12RB2Q99665 862 aa16.17■□□□□ 0.18
PCDHA1-203ENST00000504120 C1orf21Q9H246 121 aa16.17■□□□□ 0.18
PCDHA1-203ENST00000504120 CLIC1O00299 241 aa16.17■□□□□ 0.18
PCDHA1-203ENST00000504120 TPST2O60704 377 aa16.17■□□□□ 0.18
PCDHA1-203ENST00000504120 DNAJA1P31689 397 aaKnown RBP16.17■□□□□ 0.18
PCDHA1-203ENST00000504120 ADNP2Q6IQ32 1131 aa16.17■□□□□ 0.18
PCDHA1-203ENST00000504120 GDF6Q6KF10 455 aaPredicted RBP16.17■□□□□ 0.18
PCDHA1-203ENST00000504120 SCLYQ96I15 445 aa16.17■□□□□ 0.18
PCDHA1-203ENST00000504120 IFT27Q9BW83 186 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms