RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 RECKO95980 971 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 PYGLP06737 847 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 POLBP06746 335 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 MMP2P08253 660 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 GSTP1P09211 210 aaKnown RBP3.49□□□□□ -1.85
USP46-205ENST00000504078 SLC35G4P0C7Q5 338 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 RAC2P15153 192 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 CD1EP15812 388 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 UGT1A6P19224 532 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 ITGAXP20702 1163 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 AGXTP21549 392 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 IDSP22304 550 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 UGT1A1P22309 533 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 UGT1A4P22310 534 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 PCSK6P29122 969 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 SOX5P35711 763 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 HSPA9P38646 679 aaKnown RBP3.49□□□□□ -1.85
USP46-205ENST00000504078 ARL4AP40617 200 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 SSR1P43307 286 aaKnown RBP3.49□□□□□ -1.85
USP46-205ENST00000504078 ARSEP51690 589 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 IST1P53990 364 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 GSCP56915 257 aaPredicted RBP3.49□□□□□ -1.85
USP46-205ENST00000504078 LINC00310P59036 64 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 KRTAP10-2P60368 255 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 PPP2R2AP63151 447 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 LTBQ06643 244 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 NSUN2Q08J23 767 aaKnown RBP eCLIP3.49□□□□□ -1.85
USP46-205ENST00000504078 ZBTB17Q13105 803 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 PRKAA1Q13131 559 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 KRT33BQ14525 404 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 KRT81Q14533 505 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 PTPRCAPQ14761 206 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 SYCP1Q15431 976 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 ZIC1Q15915 447 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 RBBP7Q16576 425 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 DPCR1Q3MIW9 517 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 TUBB8Q3ZCM7 444 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 ATP13A5Q4VNC0 1218 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 ANKRD20A8PQ5CZ79 823 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 RPS26P11Q5JNZ5 115 aaPredicted RBP3.49□□□□□ -1.85
USP46-205ENST00000504078 ERMARDQ5T6L9 678 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 AGAP9Q5VTM2 703 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 AGAP7PQ5VUJ5 663 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 IRAK1BP1Q5VVH5 260 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 PRAMEF13Q5VWM6 474 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 TMEM198Q66K66 360 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 FCRLBQ6BAA4 426 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 TMEM220Q6QAJ8 160 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 TMEM207Q6UWW9 146 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 ABRAXAS1Q6UWZ7 409 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 IGFL3Q6UXB1 125 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 COX15Q7KZN9 410 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 ARCQ7LC44 396 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 PRIMA1Q86XR5 153 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 PHF13Q86YI8 300 aaPredicted RBP3.49□□□□□ -1.85
USP46-205ENST00000504078 TRAM1L1Q8N609 369 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 RASGEF1AQ8N9B8 481 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 C19orf47Q8N9M1 422 aaKnown RBP3.49□□□□□ -1.85
USP46-205ENST00000504078 OR2Y1Q8NGV0 311 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 ARRDC2Q8TBH0 407 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 CCHCR1Q8TD31 782 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 BRIX1Q8TDN6 353 aaKnown RBP3.49□□□□□ -1.85
USP46-205ENST00000504078 SDCCAG3Q96C92 435 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 ZNF599Q96NL3 588 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 AGAP4Q96P64 663 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 CD180Q99467 661 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 TUBGCP2Q9BSJ2 902 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 GPR63Q9BZJ6 419 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.49□□□□□ -1.85
USP46-205ENST00000504078 RMI1Q9H9A7 625 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 UGT1A7Q9HAW7 530 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 UGT1A10Q9HAW8 530 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 UGT1A8Q9HAW9 530 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 MCCC2Q9HCC0 563 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 PCDH18Q9HCL0 1135 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 TRIM39Q9HCM9 518 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 CHST11Q9NPF2 352 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 KLHL1Q9NR64 748 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 SLC22A11Q9NSA0 550 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 CCM2LQ9NUG4 571 aaPredicted RBP3.49□□□□□ -1.85
USP46-205ENST00000504078 TXLNGQ9NUQ3 528 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 RBM22Q9NW64 420 aaKnown RBP eCLIP3.49□□□□□ -1.85
USP46-205ENST00000504078 KCTD5Q9NXV2 234 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 UBP1Q9NZI7 540 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 STOX2Q9P2F5 926 aaPredicted RBP3.49□□□□□ -1.85
USP46-205ENST00000504078 SEC14L3Q9UDX4 400 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 SLC24A2Q9UI40 661 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 RWDD2AQ9UIY3 292 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 HOOK1Q9UJC3 728 aaKnown RBP3.49□□□□□ -1.85
USP46-205ENST00000504078 HS3ST3B1Q9Y662 390 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 MAU2Q9Y6X3 613 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 CCDC88CQ9P219 2028 aa3.49□□□□□ -1.85
USP46-205ENST00000504078 RP1L1Q8IWN7 2480 aaPredicted RBP3.48□□□□□ -1.85
USP46-205ENST00000504078 KRT87PA6NCN2 255 aa3.48□□□□□ -1.85
USP46-205ENST00000504078 ETV2O00321 342 aaPredicted RBP3.48□□□□□ -1.85
USP46-205ENST00000504078 CCL22O00626 93 aa3.48□□□□□ -1.85
USP46-205ENST00000504078 MAP2K7O14733 419 aa3.48□□□□□ -1.85
USP46-205ENST00000504078 ZSCAN9O15535 394 aaPredicted RBP3.48□□□□□ -1.85
USP46-205ENST00000504078 NRP2O60462 931 aa3.48□□□□□ -1.85
USP46-205ENST00000504078 PMPCBO75439 489 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms