RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 PSD4Q8NDX1 1056 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 OR6F1Q8NGZ6 308 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 RNASE11Q8TAA1 199 aaKnown RBP2.73□□□□□ -1.97
NEDD4-204ENST00000503468 ANKRD49Q8WVL7 239 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 TMEM40Q8WWA1 233 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 FCRL2Q96LA5 508 aaPredicted RBP2.73□□□□□ -1.97
NEDD4-204ENST00000503468 POP1Q99575 1024 aaKnown RBP2.73□□□□□ -1.97
NEDD4-204ENST00000503468 PKP2Q99959 881 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 APOL6Q9BWW8 343 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 GATA5Q9BWX5 397 aaPredicted RBP2.73□□□□□ -1.97
NEDD4-204ENST00000503468 PIF1Q9H611 641 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 C3orf14Q9HBI5 128 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 UBE2TQ9NPD8 197 aaPredicted RBP2.73□□□□□ -1.97
NEDD4-204ENST00000503468 FAM86C1Q9NVL1 165 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 TRPM5Q9NZQ8 1165 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 KLHL13Q9P2N7 655 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 CD300AQ9UGN4 299 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 STAP1Q9ULZ2 295 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 LYVE1Q9Y5Y7 322 aa2.73□□□□□ -1.97
NEDD4-204ENST00000503468 IGLV3-32A0A0A0MS00 114 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 A0A0G2JPF8 293 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 HNRNPCL3B7ZW38 293 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 PRMT5O14744 637 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 UBDO15205 165 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 PSMD3O43242 534 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 SSX4O60224 188 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 HCN1O60741 890 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ZNF254O75437 659 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ATE1O95260 518 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 PRKCBP05771 671 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 MMP2P08253 660 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 RBP1P09455 135 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 HNRNPCL4P0DMR1 293 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 SLC2A3P11169 496 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 CETPP11597 493 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 TFEBP19484 476 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 CYP2A7P20853 494 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 FUT4P22083 530 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 CYP2F1P24903 491 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 CTSKP43235 329 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 GATA4P43694 442 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 TSFMP43897 325 aaKnown RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 CRYBA2P53672 197 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 SLC12A2P55011 1212 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 BCAR1P56945 870 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 GNA13Q14344 377 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 QPRTQ15274 297 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 RABL3Q5HYI8 236 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 FAM45BPQ6NSW5 357 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ADAMTSL4Q6UY14 1074 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 SPOCD1Q6ZMY3 1216 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 SCD5Q86SK9 330 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 DDIASQ8IXT1 998 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 EID3Q8N140 333 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 CLHC1Q8NHS4 586 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 WDR36Q8NI36 951 aaKnown RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 VANGL1Q8TAA9 524 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 FAM45AQ8TCE6 357 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 SSC4DQ8WTU2 575 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 TFB1MQ8WVM0 346 aaKnown RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 GABRG3Q99928 467 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 C17orf62Q9BQA9 187 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 NPLQ9BXD5 320 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 SLC6A17Q9H1V8 727 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 PIGUQ9H490 435 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 CATSPERZQ9NTU4 200 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 IMP3Q9NV31 184 aaKnown RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 INTS10Q9NVR2 710 aaKnown RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ABI2Q9NYB9 513 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 SLC17A7Q9P2U7 560 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 DNAJB9Q9UBS3 223 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 RHBDD3Q9Y3P4 386 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 A0A1W2PPM1 405 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ZNF98A6NK75 572 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 PP2D1A8MPX8 630 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 I3L521 148 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 CYP26A1O43174 497 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 CHMP2AO43633 222 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 GJB3O75712 270 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 CYP7B1O75881 506 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 RASAL1O95294 804 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 F9P00740 461 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 POLBP06746 335 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ANXA6P08133 673 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 HOXA1P49639 335 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 MLC1Q15049 377 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 PRAMEF8Q5VWM4 474 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 PRAMEF7Q5VXH5 474 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 TPGS2Q68CL5 300 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 KIAA0930Q6ICG6 404 aaPredicted RBP2.72□□□□□ -1.97
NEDD4-204ENST00000503468 EPGNQ6UW88 154 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 CHST9Q7L1S5 443 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 C16orf62Q7Z3J2 963 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 SLC22A9Q8IVM8 553 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 MFSD4AQ8N468 514 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 LIX1Q8N485 282 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 DNAAF3Q8N9W5 541 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 GLIS3Q8NEA6 775 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 ZSWIM2Q8NEG5 633 aa2.72□□□□□ -1.97
NEDD4-204ENST00000503468 SLC13A3Q8WWT9 602 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms