RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 SPACA3Q8IXA5 215 aa17.62■□□□□ 0.41
PDLIM7-209ENST00000503346 OR9A1PQ8NGU1 263 aa17.62■□□□□ 0.41
PDLIM7-209ENST00000503346 DENND1AQ8TEH3 1009 aa17.62■□□□□ 0.41
PDLIM7-209ENST00000503346 SLC22A18Q96BI1 424 aa17.62■□□□□ 0.41
PDLIM7-209ENST00000503346 NAF1Q96HR8 494 aaKnown RBP17.62■□□□□ 0.41
PDLIM7-209ENST00000503346 TRAPPC9Q96Q05 1148 aa17.62■□□□□ 0.41
PDLIM7-209ENST00000503346 OLFM1Q99784 485 aa17.62■□□□□ 0.41
PDLIM7-209ENST00000503346 SPRY4Q9C004 299 aa17.62■□□□□ 0.41
PDLIM7-209ENST00000503346 TSPYL1Q9H0U9 437 aa17.62■□□□□ 0.41
PDLIM7-209ENST00000503346 RHOJQ9H4E5 214 aa17.62■□□□□ 0.41
PDLIM7-209ENST00000503346 SSUH2Q9Y2M2 353 aa17.62■□□□□ 0.41
PDLIM7-209ENST00000503346 ACACAQ13085 2346 aa17.62■□□□□ 0.41
PDLIM7-209ENST00000503346 STMND1H3BQB6 276 aa17.61■□□□□ 0.41
PDLIM7-209ENST00000503346 PIAS1O75925 651 aa17.61■□□□□ 0.41
PDLIM7-209ENST00000503346 MSL3P1P0C860 447 aa17.61■□□□□ 0.41
PDLIM7-209ENST00000503346 EBLN1P0CF75 366 aa17.61■□□□□ 0.41
PDLIM7-209ENST00000503346 ERGP11308 486 aa17.61■□□□□ 0.41
PDLIM7-209ENST00000503346 STX2P32856 288 aa17.61■□□□□ 0.41
PDLIM7-209ENST00000503346 PDAP1Q13442 181 aaKnown RBP17.61■□□□□ 0.41
PDLIM7-209ENST00000503346 TUBB3Q13509 450 aa17.61■□□□□ 0.41
PDLIM7-209ENST00000503346 KCNAB1Q14722 419 aa17.61■□□□□ 0.41
PDLIM7-209ENST00000503346 TMTC4Q5T4D3 741 aa17.61■□□□□ 0.41
PDLIM7-209ENST00000503346 BPHLQ86WA6 291 aaPredicted RBP17.61■□□□□ 0.41
PDLIM7-209ENST00000503346 EEF1AKMT1Q8WVE0 214 aa17.61■□□□□ 0.41
PDLIM7-209ENST00000503346 IFT81Q8WYA0 676 aa17.61■□□□□ 0.41
PDLIM7-209ENST00000503346 CPNE1Q99829 537 aa17.61■□□□□ 0.41
PDLIM7-209ENST00000503346 CHRNA10Q9GZZ6 450 aa17.61■□□□□ 0.41
PDLIM7-209ENST00000503346 PDE7BQ9NP56 450 aa17.61■□□□□ 0.41
PDLIM7-209ENST00000503346 SOHLH2Q9NX45 425 aa17.61■□□□□ 0.41
PDLIM7-209ENST00000503346 LNPEPQ9UIQ6 1025 aa17.61■□□□□ 0.41
PDLIM7-209ENST00000503346 ZZEF1O43149 2961 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 CELSR3Q9NYQ7 3312 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 A0A0J9YY10 115 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 FAM95CA0A1B0GW59 222 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 KRT87PA6NCN2 255 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 ISM1B1AKI9 464 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 KLK10O43240 276 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 ZBTB14O43829 449 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 PRICKLE3O43900 615 aaPredicted RBP17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 TSPAN12O95859 305 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 PVRP15151 417 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 HSD17B2P37059 387 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 GP5P40197 560 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 TUBB4BP68371 445 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 TLE3Q04726 772 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 ARHGAP19Q14CB8 494 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 TRIM73Q86UV7 250 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 PPP1R3BQ86XI6 285 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 MYO1HQ8N1T3 1032 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 LMNTD1Q8N9Z9 388 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 VPS39Q96JC1 886 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 ELMO2Q96JJ3 720 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 FCRL4Q96PJ5 515 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 FMO2Q99518 471 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 SYTL2Q9HCH5 934 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 FGF21Q9NSA1 209 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 TXNDC16Q9P2K2 825 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 RARRES3Q9UL19 164 aa17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 TMEM184BQ9Y519 407 aaPredicted RBP17.6■□□□□ 0.41
PDLIM7-209ENST00000503346 URB1O60287 2271 aaKnown RBP17.59■□□□□ 0.41
PDLIM7-209ENST00000503346 SLC16A5O15375 505 aa17.59■□□□□ 0.41
PDLIM7-209ENST00000503346 MAP3K7O43318 606 aa17.59■□□□□ 0.41
PDLIM7-209ENST00000503346 ZNF500O60304 480 aaPredicted RBP17.59■□□□□ 0.41
PDLIM7-209ENST00000503346 FKBP9O95302 570 aa17.59■□□□□ 0.41
PDLIM7-209ENST00000503346 C8GP07360 202 aa17.59■□□□□ 0.41
PDLIM7-209ENST00000503346 MAP4P27816 1152 aaKnown RBP17.59■□□□□ 0.41
PDLIM7-209ENST00000503346 ITPKBP27987 946 aa17.59■□□□□ 0.41
PDLIM7-209ENST00000503346 TAS2R39P59534 338 aa17.59■□□□□ 0.41
PDLIM7-209ENST00000503346 IL2P60568 153 aa17.59■□□□□ 0.41
PDLIM7-209ENST00000503346 SP140Q13342 867 aa17.59■□□□□ 0.41
PDLIM7-209ENST00000503346 NAB1Q13506 487 aa17.59■□□□□ 0.41
PDLIM7-209ENST00000503346 KBTBD12Q3ZCT8 623 aa17.59■□□□□ 0.41
PDLIM7-209ENST00000503346 UBE2R2Q712K3 238 aaPredicted RBP17.59■□□□□ 0.41
PDLIM7-209ENST00000503346 C2orf73Q8N5S3 287 aaPredicted RBP17.59■□□□□ 0.41
PDLIM7-209ENST00000503346 C19orf47Q8N9M1 422 aaKnown RBP17.59■□□□□ 0.41
PDLIM7-209ENST00000503346 OR8K5Q8NH50 307 aa17.59■□□□□ 0.41
PDLIM7-209ENST00000503346 FBF1Q8TES7 1133 aa17.59■□□□□ 0.41
PDLIM7-209ENST00000503346 ZNF501Q96CX3 271 aaPredicted RBP17.59■□□□□ 0.41
PDLIM7-209ENST00000503346 LINGO1Q96FE5 620 aa17.59■□□□□ 0.41
PDLIM7-209ENST00000503346 TCTN2Q96GX1 697 aa17.59■□□□□ 0.41
PDLIM7-209ENST00000503346 PDLIM5Q96HC4 596 aaKnown RBP17.59■□□□□ 0.41
PDLIM7-209ENST00000503346 PKP4Q99569 1192 aa17.59■□□□□ 0.41
PDLIM7-209ENST00000503346 SLC12A9Q9BXP2 914 aa17.59■□□□□ 0.41
PDLIM7-209ENST00000503346 PILRAQ9UKJ1 303 aa17.59■□□□□ 0.41
PDLIM7-209ENST00000503346 ANKRD11Q6UB99 2663 aaPredicted RBP17.58■□□□□ 0.41
PDLIM7-209ENST00000503346 A0A1W2PPV9 198 aa17.58■□□□□ 0.4
PDLIM7-209ENST00000503346 STK17BO94768 372 aa17.58■□□□□ 0.4
PDLIM7-209ENST00000503346 DLGAP3O95886 979 aa17.58■□□□□ 0.4
PDLIM7-209ENST00000503346 ZNF37AP17032 561 aaPredicted RBP17.58■□□□□ 0.4
PDLIM7-209ENST00000503346 OAS2P29728 719 aaKnown RBP17.58■□□□□ 0.4
PDLIM7-209ENST00000503346 PGGT1BP53609 377 aa17.58■□□□□ 0.4
PDLIM7-209ENST00000503346 FASTKQ14296 549 aaKnown RBP17.58■□□□□ 0.4
PDLIM7-209ENST00000503346 TGIF1Q15583 401 aa17.58■□□□□ 0.4
PDLIM7-209ENST00000503346 ZIC1Q15915 447 aa17.58■□□□□ 0.4
PDLIM7-209ENST00000503346 TMEM207Q6UWW9 146 aa17.58■□□□□ 0.4
PDLIM7-209ENST00000503346 TAX1BP1Q86VP1 789 aa17.58■□□□□ 0.4
PDLIM7-209ENST00000503346 CTAGE3PQ8IX95 158 aa17.58■□□□□ 0.4
PDLIM7-209ENST00000503346 IFT20Q8IY31 132 aa17.58■□□□□ 0.4
PDLIM7-209ENST00000503346 LRRN4CLQ8ND94 238 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms