RNA–Protein interactions for RNA: ENST00000498519.5

SHANK2-217, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-217ENST00000498519 MCATQ8IVS2 390 aaKnown RBP13.13□□□□□ -0.31
SHANK2-217ENST00000498519 TTC29Q8NA56 475 aaPredicted RBP13.13□□□□□ -0.31
SHANK2-217ENST00000498519 CDKN2AIPNLQ96HQ2 116 aa13.13□□□□□ -0.31
SHANK2-217ENST00000498519 CNDP1Q96KN2 507 aa13.13□□□□□ -0.31
SHANK2-217ENST00000498519 ZBTB20Q9HC78 741 aaPredicted RBP13.13□□□□□ -0.31
SHANK2-217ENST00000498519 OLAHQ9NV23 265 aa13.13□□□□□ -0.31
SHANK2-217ENST00000498519 SPHK1Q9NYA1 384 aa13.13□□□□□ -0.31
SHANK2-217ENST00000498519 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.13□□□□□ -0.31
SHANK2-217ENST00000498519 NTNG1Q9Y2I2 539 aa13.13□□□□□ -0.31
SHANK2-217ENST00000498519 MRFAP1Q9Y605 127 aa13.13□□□□□ -0.31
SHANK2-217ENST00000498519 CSMD1Q96PZ7 3565 aa13.13□□□□□ -0.31
SHANK2-217ENST00000498519 DSCR3O14972 297 aa13.12□□□□□ -0.31
SHANK2-217ENST00000498519 CNOT3O75175 753 aaKnown RBP13.12□□□□□ -0.31
SHANK2-217ENST00000498519 S1PR4O95977 384 aa13.12□□□□□ -0.31
SHANK2-217ENST00000498519 GAS8O95995 478 aa13.12□□□□□ -0.31
SHANK2-217ENST00000498519 PTMAP06454 111 aaKnown RBP13.12□□□□□ -0.31
SHANK2-217ENST00000498519 STSP08842 583 aa13.12□□□□□ -0.31
SHANK2-217ENST00000498519 MYBL2P10244 700 aa13.12□□□□□ -0.31
SHANK2-217ENST00000498519 FDXRP22570 491 aa13.12□□□□□ -0.31
SHANK2-217ENST00000498519 PTPN7P35236 360 aa13.12□□□□□ -0.31
SHANK2-217ENST00000498519 SPA17Q15506 151 aa13.12□□□□□ -0.31
SHANK2-217ENST00000498519 INAQ16352 499 aa13.12□□□□□ -0.31
SHANK2-217ENST00000498519 NKG7Q16617 165 aa13.12□□□□□ -0.31
SHANK2-217ENST00000498519 HIF1AQ16665 826 aa13.12□□□□□ -0.31
SHANK2-217ENST00000498519 P3H1Q32P28 736 aa13.12□□□□□ -0.31
SHANK2-217ENST00000498519 SP5Q6BEB4 398 aaPredicted RBP13.12□□□□□ -0.31
SHANK2-217ENST00000498519 MTFR2Q6P444 385 aa13.12□□□□□ -0.31
SHANK2-217ENST00000498519 TTC23LQ6PF05 361 aa13.12□□□□□ -0.31
SHANK2-217ENST00000498519 LINC00523Q86TU6 105 aa13.12□□□□□ -0.31
SHANK2-217ENST00000498519 VSTM4Q8IW00 320 aa13.12□□□□□ -0.31
SHANK2-217ENST00000498519 RAB42Q8N4Z0 105 aa13.12□□□□□ -0.31
SHANK2-217ENST00000498519 FLVCR1-AS1Q8TAF5 88 aa13.12□□□□□ -0.31
SHANK2-217ENST00000498519 MRFAP1L1Q96HT8 127 aa13.12□□□□□ -0.31
SHANK2-217ENST00000498519 RAB11FIP5Q9BXF6 653 aa13.12□□□□□ -0.31
SHANK2-217ENST00000498519 OSBPL8Q9BZF1 889 aa13.12□□□□□ -0.31
SHANK2-217ENST00000498519 ENAMQ9NRM1 1142 aa13.12□□□□□ -0.31
SHANK2-217ENST00000498519 CUTCQ9NTM9 273 aa13.12□□□□□ -0.31
SHANK2-217ENST00000498519 TNRC6AQ8NDV7 1962 aaKnown RBP13.12□□□□□ -0.31
SHANK2-217ENST00000498519 SLC5A10A0PJK1 596 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 ARHGAP10A1A4S6 786 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 DYTNA2CJ06 578 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 GOLGA6L9A6NEM1 432 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 AKR1B15C9JRZ8 316 aaPredicted RBP13.11□□□□□ -0.31
SHANK2-217ENST00000498519 CCL22O00626 93 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 SOCS6O14544 535 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 PJA2O43164 708 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 HCRTR1O43613 425 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 SRPX2O60687 465 aaPredicted RBP13.11□□□□□ -0.31
SHANK2-217ENST00000498519 USP1O94782 785 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 MAGP20916 626 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 MSNP26038 577 aaKnown RBP13.11□□□□□ -0.31
SHANK2-217ENST00000498519 CDKN1CP49918 316 aaPredicted RBP13.11□□□□□ -0.31
SHANK2-217ENST00000498519 OCA2Q04671 838 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 MFAP5Q13361 173 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 OLIG2Q13516 323 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 NAA25Q14CX7 972 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.11□□□□□ -0.31
SHANK2-217ENST00000498519 KIRREL2Q6UWL6 708 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 KLHDC8BQ8IXV7 354 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 PIANPQ8IYJ0 282 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 CCDC110Q8TBZ0 833 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 ASZ1Q8WWH4 475 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 ZUFSPQ96AP4 578 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 THOC3Q96J01 351 aaKnown RBP13.11□□□□□ -0.31
SHANK2-217ENST00000498519 SPSB2Q99619 263 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 NRTNQ99748 197 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 SLX1AQ9BQ83 275 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 C10orf88Q9H8K7 445 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 SLC22A11Q9NSA0 550 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 COPG2Q9UBF2 871 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 SUCOQ9UBS9 1254 aaKnown RBP13.11□□□□□ -0.31
SHANK2-217ENST00000498519 PCDHA3Q9Y5H8 950 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 KLF2Q9Y5W3 355 aaPredicted RBP13.11□□□□□ -0.31
SHANK2-217ENST00000498519 HS3ST3B1Q9Y662 390 aa13.11□□□□□ -0.31
SHANK2-217ENST00000498519 POLEQ07864 2286 aa13.1□□□□□ -0.31
SHANK2-217ENST00000498519 TARM1B6A8C7 271 aa13.1□□□□□ -0.31
SHANK2-217ENST00000498519 BHMG1C9JSJ3 638 aaPredicted RBP13.1□□□□□ -0.31
SHANK2-217ENST00000498519 PRSS44E7EML9 344 aa13.1□□□□□ -0.31
SHANK2-217ENST00000498519 E2F3O00716 465 aa13.1□□□□□ -0.31
SHANK2-217ENST00000498519 PCDH17O14917 1159 aa13.1□□□□□ -0.31
SHANK2-217ENST00000498519 HPP00738 406 aa13.1□□□□□ -0.31
SHANK2-217ENST00000498519 CD9P21926 228 aa13.1□□□□□ -0.31
SHANK2-217ENST00000498519 PKLRP30613 574 aa13.1□□□□□ -0.31
SHANK2-217ENST00000498519 CTNNA1P35221 906 aaKnown RBP13.1□□□□□ -0.31
SHANK2-217ENST00000498519 GCGRP47871 477 aa13.1□□□□□ -0.31
SHANK2-217ENST00000498519 RWDD2BP57060 319 aa13.1□□□□□ -0.31
SHANK2-217ENST00000498519 AP2B1P63010 937 aa13.1□□□□□ -0.31
SHANK2-217ENST00000498519 ARG2P78540 354 aa13.1□□□□□ -0.31
SHANK2-217ENST00000498519 ART3Q13508 389 aa13.1□□□□□ -0.31
SHANK2-217ENST00000498519 SPARCL1Q14515 664 aa13.1□□□□□ -0.31
SHANK2-217ENST00000498519 POU6F1Q14863 301 aa13.1□□□□□ -0.31
SHANK2-217ENST00000498519 BRD3Q15059 726 aa13.1□□□□□ -0.31
SHANK2-217ENST00000498519 SF1Q15637 639 aaKnown RBP13.1□□□□□ -0.31
SHANK2-217ENST00000498519 PRMT9Q6P2P2 845 aa13.1□□□□□ -0.31
SHANK2-217ENST00000498519 UNC5DQ6UXZ4 953 aa13.1□□□□□ -0.31
SHANK2-217ENST00000498519 NLRP9Q7RTR0 991 aa13.1□□□□□ -0.31
SHANK2-217ENST00000498519 DCUN1D3Q8IWE4 304 aa13.1□□□□□ -0.31
SHANK2-217ENST00000498519 PARP9Q8IXQ6 854 aa13.1□□□□□ -0.31
SHANK2-217ENST00000498519 KBTBD2Q8IY47 623 aa13.1□□□□□ -0.31
SHANK2-217ENST00000498519 CCDC170Q8IYT3 715 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms