RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 PCDH7O60245 1069 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 GAS7O60861 476 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 LRRN2O75325 713 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 GUCY1B2O75343 617 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 TACC1O75410 805 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 IPO7O95373 1038 aaKnown RBP1.4□□□□□ -2.19
XRN1-214ENST00000498077 FGFR1OPO95684 399 aaKnown RBP1.4□□□□□ -2.19
XRN1-214ENST00000498077 IGKV1-17P01599 117 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 TTRP02766 147 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 GNAI3P08754 354 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 GOLGA8HP0CJ92 632 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 LCP1P13796 627 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 CPEP16870 476 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 ZNF7P17097 686 aaPredicted RBP1.4□□□□□ -2.19
XRN1-214ENST00000498077 GABRR1P24046 479 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 CHATP28329 748 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 ADORA1P30542 326 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 BRS3P32247 399 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 THBS2P35442 1172 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 ARL1P40616 181 aaPredicted RBP1.4□□□□□ -2.19
XRN1-214ENST00000498077 MAGEA3P43357 314 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 HARS2P49590 506 aaKnown RBP1.4□□□□□ -2.19
XRN1-214ENST00000498077 MTPNP58546 118 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 RAP1AP62834 184 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 GNAI1P63096 354 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 CAP1Q01518 475 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 GHRHRQ02643 423 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 GOLGA7BQ2TAP0 167 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 S100A7L2Q5SY68 101 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 CC2D1AQ6P1N0 951 aaPredicted RBP1.4□□□□□ -2.19
XRN1-214ENST00000498077 FAM173BQ6P4H8 233 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 ENPP7Q6UWV6 458 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 CATSPERGQ6ZRH7 1159 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 PRSS48Q7RTY5 328 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 HDDC2Q7Z4H3 204 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 PEG10Q86TG7 708 aaKnown RBP1.4□□□□□ -2.19
XRN1-214ENST00000498077 CDR2LQ86X02 465 aaPredicted RBP1.4□□□□□ -2.19
XRN1-214ENST00000498077 ADGRF2Q8IZF7 708 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 MFSD4AQ8N468 514 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 OR10H4Q8NGA5 316 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 OR4K15Q8NH41 348 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 GRPEL2Q8TAA5 225 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 CNIH3Q8TBE1 160 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 DUSP19Q8WTR2 217 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 GAB3Q8WWW8 586 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 IRGQQ8WZA9 623 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 ZNF75CPQ92670 426 aaPredicted RBP1.4□□□□□ -2.19
XRN1-214ENST00000498077 PPP2R3CQ969Q6 453 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 MRPL38Q96DV4 380 aaKnown RBP1.4□□□□□ -2.19
XRN1-214ENST00000498077 CRELD1Q96HD1 420 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 PCED1BQ96HM7 432 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 CDHR1Q96JP9 859 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 EYA3Q99504 573 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 VGLL1Q99990 258 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 ACTRT3Q9BYD9 372 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 LSG1Q9H089 658 aaKnown RBP1.4□□□□□ -2.19
XRN1-214ENST00000498077 FBXL15Q9H469 300 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 RNPEPQ9H4A4 650 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 IL1RL2Q9HB29 575 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 SARS2Q9NP81 518 aaKnown RBP1.4□□□□□ -2.19
XRN1-214ENST00000498077 DMRT3Q9NQL9 472 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 TMEM260Q9NX78 707 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 SPATA7Q9P0W8 599 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 STK26Q9P289 416 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 ARHGAP20Q9P2F6 1191 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 TNFRSF10DQ9UBN6 386 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 SUN2Q9UH99 717 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 UTS2RQ9UKP6 389 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 POMT2Q9UKY4 750 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 LRFN2Q9ULH4 789 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 RNF150Q9ULK6 438 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 INVSQ9Y283 1065 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 ZNF835Q9Y2P0 537 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 SLC6A5Q9Y345 797 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 LTBP2Q14767 1821 aa1.4□□□□□ -2.19
XRN1-214ENST00000498077 DUOX1Q9NRD9 1551 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 PPIAL4EA0A075B759 164 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 IGKV1D-43A0A0B4J1Z2 117 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 DUXBA0A1W2PPF3 345 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 TRIM49BA6NDI0 452 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 GOLGA6CA6NDK9 693 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 A6NIN4 97 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 SHISA7A6NL88 538 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ZNF878C9JN71 531 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 PPIAL4DF5H284 164 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 H0YC42 278 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 TREHO43280 583 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 B3GALT2O43825 422 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 RSL1D1O76021 490 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 NCR1O76036 304 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 MT-ND2P03891 347 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 A1BGP04217 495 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 CAPNS1P04632 268 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 CD2P06729 351 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 GOLGA6DP0CG33 693 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 PPIAL4FP0DN26 164 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 LAMP2P13473 410 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ZNF19P17023 458 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 HOXB4P17483 251 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 AGXTP21549 392 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms