RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 PCGF2P35227 344 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 RDXP35241 583 aaKnown RBP2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 GRIA3P42263 894 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 PRCPP42785 496 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 MAGEA9P43362 315 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 NT5C2P49902 561 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 ASCL1P50553 236 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 HSD17B7P56937 341 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 EEFSECP57772 596 aaKnown RBP2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 SIM1P81133 766 aaPredicted RBP2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 SLC25A3Q00325 362 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 GUCY1B3Q02153 619 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 ACSM1Q08AH1 577 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 GRSF1Q12849 480 aaKnown RBP eCLIP2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 RUNX2Q13950 521 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 VEPH1Q14D04 833 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 PPP2R5BQ15173 497 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 KLHL26Q53HC5 615 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 RAB6CQ53S08 254 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 HSP90AB3PQ58FF7 597 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 NT5DC1Q5TFE4 455 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 ASPHD1Q5U4P2 390 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 TCERG1LQ5VWI1 586 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 GALNT17Q6IS24 598 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 APOBEC3HQ6NTF7 200 aaKnown RBP2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 CXCL17Q6UXB2 119 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 PQLC2Q6ZP29 291 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 INTS8Q75QN2 995 aaKnown RBP2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 MTSS1LQ765P7 747 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 CACNA2D4Q7Z3S7 1137 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 SERPINA11Q86U17 422 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 SGMS1Q86VZ5 419 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 DENND6AQ8IWF6 608 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 ZNF595Q8IYB9 648 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 TTC9BQ8N6N2 239 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 TMEM217Q8N7C4 229 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 TEX45Q8NA69 505 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 DENND6BQ8NEG7 585 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 PSMA8Q8TAA3 256 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 CEP76Q8TAP6 659 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 FBXO30Q8TB52 745 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 SLC13A3Q8WWT9 602 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 ASB10Q8WXI3 467 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 SLC9A6Q92581 669 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 RAD54LQ92698 747 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 RNF183Q96D59 192 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 REPS1Q96D71 796 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 TRIM44Q96DX7 344 aaPredicted RBP2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 ZNF503Q96F45 646 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 RBM18Q96H35 190 aaKnown RBP2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 HARBI1Q96MB7 349 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 MS4A10Q96PG2 267 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 KLHL5Q96PQ7 755 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 MYADMQ96S97 322 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 KCNK16Q96T55 309 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 CDRT15Q96T59 188 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 GAD1Q99259 594 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 TIMP4Q99727 224 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 RAB6CQ9H0N0 254 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 CDT1Q9H211 546 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 ESRP2Q9H6T0 727 aaKnown RBP2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 TLE6Q9H808 572 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 CNOT10Q9H9A5 744 aaKnown RBP2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 MLXIPLQ9NP71 852 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 MKKSQ9NPJ1 570 aaPredicted RBP2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 DCAF16Q9NXF7 216 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 COQ3Q9NZJ6 369 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 TMOD2Q9NZR1 351 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 ACTR3BQ9P1U1 418 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 VPS4AQ9UN37 437 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 KCNK7Q9Y2U2 307 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 MAP3K2Q9Y2U5 619 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 TSC22D4Q9Y3Q8 395 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 TEX264Q9Y6I9 313 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 STON1Q9Y6Q2 735 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 DUSP10Q9Y6W6 482 aa2.41□□□□□ -2.02
CKS1BP2-201ENST00000497342 UBR4Q5T4S7 5183 aa2.4□□□□□ -2.02
CKS1BP2-201ENST00000497342 MGAM2Q2M2H8 2515 aa2.4□□□□□ -2.02
CKS1BP2-201ENST00000497342 NSD1Q96L73 2696 aaPredicted RBP2.4□□□□□ -2.02
CKS1BP2-201ENST00000497342 EPPK1P58107 5090 aaKnown RBP2.4□□□□□ -2.02
CKS1BP2-201ENST00000497342 F5P12259 2224 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 BSNQ9UPA5 3926 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 PCSK5Q92824 1860 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 SYNJ2BP-COX16A0A087WUM0 186 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 A0A096LPK6 155 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 TRBV2A0A0J9YWF9 115 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 CENPVL1A0A0U1RR11 272 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 NPEPPSL1A6NEC2 478 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 KPNA7A9QM74 516 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 MSI1O43347 362 aaKnown RBP2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 PEX1O43933 1283 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 OR10H2O60403 315 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 PRAMEF11O60813 436 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 ZNF623O75123 536 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 GPC4O75487 556 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 TMCC1O94876 653 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 EPN2O95208 641 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 NDUFA10O95299 355 aa2.4□□□□□ -2.03
CKS1BP2-201ENST00000497342 IL1AP01583 271 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms