RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 FGF5P12034 268 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 IRF2P14316 349 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 EPCAMP16422 314 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 MNDAP41218 407 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 PRKCIP41743 596 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 CDO1Q16878 200 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 MCMDC2Q4G0Z9 681 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 FAM76BQ5HYJ3 339 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 FOXL2NBQ6ZUU3 175 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 NUP54Q7Z3B4 507 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 ARHGAP22Q7Z5H3 698 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 DSG4Q86SJ6 1040 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 PHLDB2Q86SQ0 1253 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 IQCA1Q86XH1 822 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 PLD3Q8IV08 490 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 TMCO5AQ8N6Q1 288 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 THAP8Q8NA92 274 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 NPEPL1Q8NDH3 523 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 DMBX1Q8NFW5 382 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 OR2T12Q8NG77 320 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 OR13J1Q8NGT2 312 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 FGFBP3Q8TAT2 258 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 CD101Q93033 1021 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 MR1Q95460 341 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 THOC1Q96FV9 657 aaKnown RBP3.75□□□□□ -1.81
SMC4-225ENST00000497203 ZNF583Q96ND8 569 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 RTP3Q9BQQ7 232 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 RETREG1Q9H6L5 497 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 ZNF701Q9NV72 531 aaPredicted RBP3.75□□□□□ -1.81
SMC4-225ENST00000497203 FAM118AQ9NWS6 357 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 DDX43Q9NXZ2 648 aaKnown RBP3.75□□□□□ -1.81
SMC4-225ENST00000497203 ERAP1Q9NZ08 941 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 TXNDC16Q9P2K2 825 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 MTUS1Q9ULD2 1270 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 JRKLQ9Y4A0 524 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 TRIM17Q9Y577 477 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 SMCHD1A6NHR9 2005 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 NOTCH4Q99466 2003 aa3.75□□□□□ -1.81
SMC4-225ENST00000497203 A0A1W2PN81 502 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 SLC7A4O43246 635 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 PGLSO95336 258 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 TGDSO95455 350 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 FAM58BPP0C7Q3 252 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 SMIM18P0DKX4 95 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 HSPA8P11142 646 aaKnown RBP3.74□□□□□ -1.81
SMC4-225ENST00000497203 AMD1P17707 334 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 GNAZP19086 355 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 AZGP1P25311 298 aaKnown RBP3.74□□□□□ -1.81
SMC4-225ENST00000497203 PTGER4P35408 488 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 SOAT1P35610 550 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 CHRNA7P36544 502 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 CRKLP46109 303 aaKnown RBP3.74□□□□□ -1.81
SMC4-225ENST00000497203 DMP1Q13316 513 aaPredicted RBP3.74□□□□□ -1.81
SMC4-225ENST00000497203 TAF13Q15543 124 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 NPTX1Q15818 432 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 ODF2Q5BJF6 829 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 LRRC73Q5JTD7 316 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 WBP2NLQ6ICG8 309 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 ZNF449Q6P9G9 518 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 CORO6Q6QEF8 472 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 MFSD6Q6ZSS7 791 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 NFE4Q86UQ8 179 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 NDUFAF2Q8N183 169 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 OR13A1Q8NGR1 328 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 NSMAFQ92636 917 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 CORO2AQ92828 525 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 NSL1Q96IY1 281 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 INTS14Q96SY0 518 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 PKP4Q99569 1192 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 PRRG4Q9BZD6 226 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 RSPH9Q9H1X1 276 aaPredicted RBP3.74□□□□□ -1.81
SMC4-225ENST00000497203 C2orf40Q9H1Z8 148 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 ECHDC1Q9NTX5 307 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 PTTG2Q9NZH5 202 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 COQ3Q9NZJ6 369 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 ZDHHC2Q9UIJ5 367 aa3.74□□□□□ -1.81
SMC4-225ENST00000497203 LEF1Q9UJU2 399 aaPredicted RBP3.74□□□□□ -1.81
SMC4-225ENST00000497203 FAF1Q9UNN5 650 aaPredicted RBP3.74□□□□□ -1.81
SMC4-225ENST00000497203 OOEPA6NGQ2 149 aa3.73□□□□□ -1.81
SMC4-225ENST00000497203 PLOD2O00469 737 aa3.73□□□□□ -1.81
SMC4-225ENST00000497203 PRKNO60260 465 aaPredicted RBP3.73□□□□□ -1.81
SMC4-225ENST00000497203 PRKRAO75569 313 aaKnown RBP3.73□□□□□ -1.81
SMC4-225ENST00000497203 RPS6KA5O75582 802 aa3.73□□□□□ -1.81
SMC4-225ENST00000497203 PIGNO95427 931 aa3.73□□□□□ -1.81
SMC4-225ENST00000497203 NR3C1P04150 777 aa3.73□□□□□ -1.81
SMC4-225ENST00000497203 ATP1A1P05023 1023 aaKnown RBP3.73□□□□□ -1.81
SMC4-225ENST00000497203 VDRP11473 427 aa3.73□□□□□ -1.81
SMC4-225ENST00000497203 MSH3P20585 1137 aa3.73□□□□□ -1.81
SMC4-225ENST00000497203 EPHA2P29317 976 aa3.73□□□□□ -1.81
SMC4-225ENST00000497203 TUBB4BP68371 445 aa3.73□□□□□ -1.81
SMC4-225ENST00000497203 KLC1Q07866 573 aa3.73□□□□□ -1.81
SMC4-225ENST00000497203 DMPKQ09013 629 aa3.73□□□□□ -1.81
SMC4-225ENST00000497203 ILF3Q12906 894 aaKnown RBP eCLIP3.73□□□□□ -1.81
SMC4-225ENST00000497203 VEZF1Q14119 521 aa3.73□□□□□ -1.81
SMC4-225ENST00000497203 CA9Q16790 459 aa3.73□□□□□ -1.81
SMC4-225ENST00000497203 ODF4Q2M2E3 257 aa3.73□□□□□ -1.81
SMC4-225ENST00000497203 ZNF718Q3SXZ3 478 aa3.73□□□□□ -1.81
SMC4-225ENST00000497203 ZRANB3Q5FWF4 1079 aa3.73□□□□□ -1.81
SMC4-225ENST00000497203 NHSL2Q5HYW2 709 aa3.73□□□□□ -1.81
SMC4-225ENST00000497203 CYP4A22Q5TCH4 519 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms