RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 TGM1P22735 817 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 GIFP27352 417 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 PSMA5P28066 241 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 RBL1P28749 1068 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 PTPN4P29074 926 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 EIF1P41567 113 aaKnown RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 IL12RB1P42701 662 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 CRATP43155 626 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 RAB13P51153 203 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 AGFG1P52594 562 aaKnown RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 VAV2P52735 878 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 POLGP54098 1239 aaPredicted RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 NAGLUP54802 743 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 ADKP55263 362 aaKnown RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 KCNJ2P63252 427 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 CDK16Q00536 496 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 SRSF2Q01130 221 aaKnown RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 CHRNDQ07001 517 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 SLAQ13239 276 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 TDGQ13569 410 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 ALKBH1Q13686 389 aaKnown RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 PKP1Q13835 747 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 EMC2Q15006 297 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 MTHFSDQ2M296 383 aaKnown RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 DUSP28Q4G0W2 176 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 BCL7AQ4VC05 210 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 RUNDC3AQ59EK9 446 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 PIP5KL1Q5T9C9 394 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 JADE1Q6IE81 842 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 HEPHL1Q6MZM0 1159 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 ZFP1Q6P2D0 407 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 GPRIN3Q6ZVF9 776 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 BHLHA15Q7RTS1 189 aaPredicted RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 SSX9Q7RTT3 188 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF551Q7Z340 670 aaPredicted RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 LRRC8AQ8IWT6 810 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 TRIM48Q8IWZ4 208 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 ZFPM1Q8IX07 1006 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 SP8Q8IXZ3 490 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 PRSS58Q8IYP2 241 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 ULK2Q8IYT8 1036 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 CPEB3Q8NE35 698 aaKnown RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 OR5M1Q8NGP8 315 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 KBTBD7Q8WVZ9 684 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 BORCS5Q969J3 196 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF707Q96C28 371 aaPredicted RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 MTBPQ96DY7 904 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 KTI12Q96EK9 354 aaPredicted RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 PTCD3Q96EY7 689 aaKnown RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 ALG14Q96F25 216 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 LINGO1Q96FE5 620 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 PGAP3Q96FM1 320 aaPredicted RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF479Q96JC4 524 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 SERPINB12Q96P63 405 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 CCT8L2Q96SF2 557 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 ZBTB18Q99592 522 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF251Q9BRH9 671 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 PELOQ9BRX2 385 aaKnown RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 GSDMCQ9BYG8 508 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 OR2B2Q9GZK3 357 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC5A7Q9GZV3 580 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 BTBD1Q9H0C5 482 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 THAP2Q9H0W7 228 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 PCED1AQ9H1Q7 454 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 PRDM13Q9H4Q3 707 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 CNOT10Q9H9A5 744 aaKnown RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 MRPL44Q9H9J2 332 aaKnown RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 BRF2Q9HAW0 419 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 KCNMB3Q9NPA1 279 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 SAYSD1Q9NPB0 183 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 IFT46Q9NQC8 304 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 PNPLA3Q9NST1 481 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 TMEM140Q9NV12 185 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 KLHL28Q9NXS3 571 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 TAS2R1Q9NYW7 299 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 CLEC2DQ9UHP7 191 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 ENPP5Q9UJA9 477 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 TSPAN16Q9UKR8 245 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 SARDHQ9UL12 918 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 PCDHA6Q9UN73 950 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 ZFR2Q9UPR6 939 aaKnown RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 AAR2Q9Y312 384 aaKnown RBP3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 PCDHAC2Q9Y5I4 1007 aa3.04□□□□□ -1.92
SNRNP48-202ENST00000496946 UACAQ9BZF9 1416 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 CNTNAP2Q9UHC6 1331 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 NPIPA2E9PIF3 369 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 UBE2Q2LH0YL09 131 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 PLK4O00444 970 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 PODXLO00592 558 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 WNT10BO00744 389 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 PIP5K1BO14986 540 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 LRRTM2O43300 516 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 KCNAB3O43448 404 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 CCNT2O60583 730 aaKnown RBP3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 CSDE1O75534 798 aaKnown RBP3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF821O75541 412 aaPredicted RBP3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 STC2O76061 302 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 NOL4O94818 638 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 METTL18O95568 372 aa3.03□□□□□ -1.92
SNRNP48-202ENST00000496946 ONECUT2O95948 504 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms