RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 GSTA5Q7RTV2 222 aa12.47□□□□□ -0.41
FN1-226ENST00000496542 MRGPREQ86SM8 312 aa12.47□□□□□ -0.41
FN1-226ENST00000496542 DNAJC22Q8N4W6 341 aa12.47□□□□□ -0.41
FN1-226ENST00000496542 FAM26EQ8N5C1 309 aa12.47□□□□□ -0.41
FN1-226ENST00000496542 LINC01555Q8NAE3 123 aa12.47□□□□□ -0.41
FN1-226ENST00000496542 GSDMBQ8TAX9 411 aa12.47□□□□□ -0.41
FN1-226ENST00000496542 CPT1CQ8TCG5 803 aa12.47□□□□□ -0.41
FN1-226ENST00000496542 PROKR1Q8TCW9 393 aa12.47□□□□□ -0.41
FN1-226ENST00000496542 SKA2Q8WVK7 121 aaPredicted RBP12.47□□□□□ -0.41
FN1-226ENST00000496542 PEX13Q92968 403 aa12.47□□□□□ -0.41
FN1-226ENST00000496542 SGSM3Q96HU1 749 aa12.47□□□□□ -0.41
FN1-226ENST00000496542 GBP5Q96PP8 586 aa12.47□□□□□ -0.41
FN1-226ENST00000496542 NUDT9Q9BW91 350 aa12.47□□□□□ -0.41
FN1-226ENST00000496542 MFRPQ9BY79 579 aa12.47□□□□□ -0.41
FN1-226ENST00000496542 LZTFL1Q9NQ48 299 aa12.47□□□□□ -0.41
FN1-226ENST00000496542 EIF2B3Q9NR50 452 aaKnown RBP12.47□□□□□ -0.41
FN1-226ENST00000496542 GPR83Q9NYM4 423 aa12.47□□□□□ -0.41
FN1-226ENST00000496542 IFT80Q9P2H3 777 aaPredicted RBP12.47□□□□□ -0.41
FN1-226ENST00000496542 GNPTGQ9UJJ9 305 aa12.47□□□□□ -0.41
FN1-226ENST00000496542 SRPK3Q9UPE1 567 aa12.47□□□□□ -0.41
FN1-226ENST00000496542 PLCL2Q9UPR0 1127 aa12.47□□□□□ -0.41
FN1-226ENST00000496542 CDYLQ9Y232 598 aa12.47□□□□□ -0.41
FN1-226ENST00000496542 PTRH2Q9Y3E5 179 aaKnown RBP12.47□□□□□ -0.41
FN1-226ENST00000496542 CLEC18AA5D8T8 446 aa12.46□□□□□ -0.41
FN1-226ENST00000496542 DPM1O60762 260 aa12.46□□□□□ -0.41
FN1-226ENST00000496542 VPS4BO75351 444 aa12.46□□□□□ -0.41
FN1-226ENST00000496542 KLF7O75840 302 aaPredicted RBP12.46□□□□□ -0.41
FN1-226ENST00000496542 FGGP02679 453 aa12.46□□□□□ -0.41
FN1-226ENST00000496542 CD9P21926 228 aa12.46□□□□□ -0.41
FN1-226ENST00000496542 BDKRB1P46663 353 aa12.46□□□□□ -0.41
FN1-226ENST00000496542 UQCRFS1P47985 274 aa12.46□□□□□ -0.41
FN1-226ENST00000496542 FOXL2P58012 376 aa12.46□□□□□ -0.41
FN1-226ENST00000496542 SRSF1Q07955 248 aaKnown RBP eCLIP12.46□□□□□ -0.41
FN1-226ENST00000496542 CCNG2Q16589 344 aa12.46□□□□□ -0.41
FN1-226ENST00000496542 KCTD19Q17RG1 926 aaPredicted RBP12.46□□□□□ -0.41
FN1-226ENST00000496542 NKAIN1Q4KMZ8 207 aa12.46□□□□□ -0.41
FN1-226ENST00000496542 CLEC18BQ6UXF7 455 aa12.46□□□□□ -0.41
FN1-226ENST00000496542 CLEC18CQ8NCF0 446 aa12.46□□□□□ -0.41
FN1-226ENST00000496542 UBE2Q2Q8WVN8 375 aa12.46□□□□□ -0.41
FN1-226ENST00000496542 NDC1Q9BTX1 674 aa12.46□□□□□ -0.41
FN1-226ENST00000496542 MENTQ9BUN1 341 aa12.46□□□□□ -0.41
FN1-226ENST00000496542 IL22Q9GZX6 179 aa12.46□□□□□ -0.41
FN1-226ENST00000496542 TREX1Q9NSU2 369 aa12.46□□□□□ -0.41
FN1-226ENST00000496542 EURLQ9NYK6 297 aa12.46□□□□□ -0.41
FN1-226ENST00000496542 BFARQ9NZS9 450 aa12.46□□□□□ -0.41
FN1-226ENST00000496542 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.46□□□□□ -0.41
FN1-226ENST00000496542 SLC39A10Q9ULF5 831 aa12.46□□□□□ -0.41
FN1-226ENST00000496542 VPS4AQ9UN37 437 aa12.46□□□□□ -0.41
FN1-226ENST00000496542 PCDHGB7Q9Y5F8 929 aa12.46□□□□□ -0.41
FN1-226ENST00000496542 MDC1Q14676 2089 aaKnown RBP12.46□□□□□ -0.42
FN1-226ENST00000496542 DOCK10Q96BY6 2186 aa12.45□□□□□ -0.42
FN1-226ENST00000496542 PEX12O00623 359 aa12.45□□□□□ -0.42
FN1-226ENST00000496542 RASGRF2O14827 1237 aa12.45□□□□□ -0.42
FN1-226ENST00000496542 CNOT3O75175 753 aaKnown RBP12.45□□□□□ -0.42
FN1-226ENST00000496542 NDUFS3O75489 264 aa12.45□□□□□ -0.42
FN1-226ENST00000496542 SORBS2O94875 1100 aaKnown RBP12.45□□□□□ -0.42
FN1-226ENST00000496542 SLCO2B1O94956 709 aa12.45□□□□□ -0.42
FN1-226ENST00000496542 ALAS2P22557 587 aa12.45□□□□□ -0.42
FN1-226ENST00000496542 GNLYP22749 145 aa12.45□□□□□ -0.42
FN1-226ENST00000496542 MGAT1P26572 445 aa12.45□□□□□ -0.42
FN1-226ENST00000496542 NMBRP28336 390 aa12.45□□□□□ -0.42
FN1-226ENST00000496542 KCNJ1P48048 391 aa12.45□□□□□ -0.42
FN1-226ENST00000496542 TERF1P54274 439 aa12.45□□□□□ -0.42
FN1-226ENST00000496542 EIF3BP55884 814 aaKnown RBP12.45□□□□□ -0.42
FN1-226ENST00000496542 GRB7Q14451 532 aa12.45□□□□□ -0.42
FN1-226ENST00000496542 PRR30Q53SZ7 412 aaPredicted RBP12.45□□□□□ -0.42
FN1-226ENST00000496542 JMJD6Q6NYC1 403 aaPredicted RBP12.45□□□□□ -0.42
FN1-226ENST00000496542 DRICH1Q6PGQ1 229 aaPredicted RBP12.45□□□□□ -0.42
FN1-226ENST00000496542 CES3Q6UWW8 571 aa12.45□□□□□ -0.42
FN1-226ENST00000496542 MCATQ8IVS2 390 aaKnown RBP12.45□□□□□ -0.42
FN1-226ENST00000496542 MPP5Q8N3R9 675 aa12.45□□□□□ -0.42
FN1-226ENST00000496542 OR2Y1Q8NGV0 311 aa12.45□□□□□ -0.42
FN1-226ENST00000496542 OR2L8Q8NGY9 312 aa12.45□□□□□ -0.42
FN1-226ENST00000496542 DLG3Q92796 817 aa12.45□□□□□ -0.42
FN1-226ENST00000496542 SLC22A18Q96BI1 424 aa12.45□□□□□ -0.42
FN1-226ENST00000496542 IP6K3Q96PC2 410 aa12.45□□□□□ -0.42
FN1-226ENST00000496542 PANX3Q96QZ0 392 aa12.45□□□□□ -0.42
FN1-226ENST00000496542 P2RY12Q9H244 342 aa12.45□□□□□ -0.42
FN1-226ENST00000496542 INTS7Q9NVH2 962 aaKnown RBP12.45□□□□□ -0.42
FN1-226ENST00000496542 SYBUQ9NX95 663 aa12.45□□□□□ -0.42
FN1-226ENST00000496542 MAP10Q9P2G4 905 aa12.45□□□□□ -0.42
FN1-226ENST00000496542 TSR3Q9UJK0 312 aaKnown RBP12.45□□□□□ -0.42
FN1-226ENST00000496542 RUVBL2Q9Y230 463 aaKnown RBP12.45□□□□□ -0.42
FN1-226ENST00000496542 DRG1Q9Y295 367 aaKnown RBP12.45□□□□□ -0.42
FN1-226ENST00000496542 PCM1Q15154 2024 aa12.45□□□□□ -0.42
FN1-226ENST00000496542 KRT87PA6NCN2 255 aa12.44□□□□□ -0.42
FN1-226ENST00000496542 CEP104O60308 925 aa12.44□□□□□ -0.42
FN1-226ENST00000496542 S1PR4O95977 384 aa12.44□□□□□ -0.42
FN1-226ENST00000496542 RPS3P23396 243 aaKnown RBP eCLIP12.44□□□□□ -0.425e-67■■□□□ 14.4
FN1-226ENST00000496542 GRIA3P42263 894 aa12.44□□□□□ -0.42
FN1-226ENST00000496542 NPY2RP49146 381 aa12.44□□□□□ -0.42
FN1-226ENST00000496542 SSPNQ14714 243 aa12.44□□□□□ -0.42
FN1-226ENST00000496542 SF1Q15637 639 aaKnown RBP12.44□□□□□ -0.42
FN1-226ENST00000496542 VWA5B1Q5TIE3 1220 aa12.44□□□□□ -0.42
FN1-226ENST00000496542 SLC6A19Q695T7 634 aa12.44□□□□□ -0.42
FN1-226ENST00000496542 FCRL6Q6DN72 434 aa12.44□□□□□ -0.42
FN1-226ENST00000496542 TTC23LQ6PF05 361 aa12.44□□□□□ -0.42
FN1-226ENST00000496542 FIGLAQ6QHK4 219 aa12.44□□□□□ -0.42
FN1-226ENST00000496542 C4orf22Q6V702 233 aa12.44□□□□□ -0.42
FN1-226ENST00000496542 TTLL10Q6ZVT0 673 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms