RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 ARHGAP9Q9BRR9 750 aa19.92■□□□□ 0.78
COL9A2-211ENST00000496215 LHX9Q9NQ69 397 aa19.92■□□□□ 0.78
COL9A2-211ENST00000496215 GALPQ9UBC7 116 aa19.92■□□□□ 0.78
COL9A2-211ENST00000496215 PADI1Q9ULC6 663 aa19.92■□□□□ 0.78
COL9A2-211ENST00000496215 CHMP2BQ9UQN3 213 aa19.92■□□□□ 0.78
COL9A2-211ENST00000496215 PCDHB3Q9Y5E6 796 aa19.92■□□□□ 0.78
COL9A2-211ENST00000496215 EFCAB8A8MWE9 144 aa19.91■□□□□ 0.78
COL9A2-211ENST00000496215 NDC80O14777 642 aa19.91■□□□□ 0.78
COL9A2-211ENST00000496215 ERVK-10P10266 1014 aa19.91■□□□□ 0.78
COL9A2-211ENST00000496215 F8A1P23610 371 aa19.91■□□□□ 0.78
COL9A2-211ENST00000496215 ITGA1P56199 1179 aa19.91■□□□□ 0.78
COL9A2-211ENST00000496215 MC1RQ01726 317 aa19.91■□□□□ 0.78
COL9A2-211ENST00000496215 CDC20Q12834 499 aa19.91■□□□□ 0.78
COL9A2-211ENST00000496215 ACSBG2Q5FVE4 666 aa19.91■□□□□ 0.78
COL9A2-211ENST00000496215 ZNF549Q6P9A3 640 aa19.91■□□□□ 0.78
COL9A2-211ENST00000496215 SYT10Q6XYQ8 523 aa19.91■□□□□ 0.78
COL9A2-211ENST00000496215 GIMAP7Q8NHV1 300 aa19.91■□□□□ 0.78
COL9A2-211ENST00000496215 CT55Q8WUE5 264 aa19.91■□□□□ 0.78
COL9A2-211ENST00000496215 LRRC39Q96DD0 335 aa19.91■□□□□ 0.78
COL9A2-211ENST00000496215 CERS2Q96G23 380 aa19.91■□□□□ 0.78
COL9A2-211ENST00000496215 CFAP36Q96G28 342 aa19.91■□□□□ 0.78
COL9A2-211ENST00000496215 FAM114A2Q9NRY5 505 aa19.91■□□□□ 0.78
COL9A2-211ENST00000496215 ZC3H7BQ9UGR2 993 aaKnown RBP19.91■□□□□ 0.78
COL9A2-211ENST00000496215 KCND3Q9UK17 655 aa19.91■□□□□ 0.78
COL9A2-211ENST00000496215 C21orf140B9A014 251 aa19.9■□□□□ 0.78
COL9A2-211ENST00000496215 MATN4O95460 622 aa19.9■□□□□ 0.78
COL9A2-211ENST00000496215 PRKAR1AP10644 381 aa19.9■□□□□ 0.78
COL9A2-211ENST00000496215 ELK3P41970 407 aa19.9■□□□□ 0.78
COL9A2-211ENST00000496215 DNASE1L3Q13609 305 aa19.9■□□□□ 0.78
COL9A2-211ENST00000496215 KLHL38Q2WGJ6 581 aa19.9■□□□□ 0.78
COL9A2-211ENST00000496215 DEFB110Q30KQ9 67 aa19.9■□□□□ 0.78
COL9A2-211ENST00000496215 CCSMST1Q4G0I0 132 aa19.9■□□□□ 0.78
COL9A2-211ENST00000496215 IGDCC3Q8IVU1 814 aa19.9■□□□□ 0.78
COL9A2-211ENST00000496215 C2orf73Q8N5S3 287 aaPredicted RBP19.9■□□□□ 0.78
COL9A2-211ENST00000496215 C2CD4AQ8NCU7 369 aaPredicted RBP19.9■□□□□ 0.78
COL9A2-211ENST00000496215 CLIP3Q96DZ5 547 aa19.9■□□□□ 0.78
COL9A2-211ENST00000496215 PWWP2AQ96N64 755 aa19.9■□□□□ 0.78
COL9A2-211ENST00000496215 CHRNA10Q9GZZ6 450 aa19.9■□□□□ 0.78
COL9A2-211ENST00000496215 SPATA7Q9P0W8 599 aa19.9■□□□□ 0.78
COL9A2-211ENST00000496215 KLHL42Q9P2K6 505 aa19.9■□□□□ 0.78
COL9A2-211ENST00000496215 SERTAD3Q9UJW9 196 aa19.9■□□□□ 0.78
COL9A2-211ENST00000496215 MRPS18BQ9Y676 258 aaKnown RBP19.9■□□□□ 0.78
COL9A2-211ENST00000496215 KRT87PA6NCN2 255 aa19.89■□□□□ 0.77
COL9A2-211ENST00000496215 COL6A6A6NMZ7 2263 aa19.89■□□□□ 0.77
COL9A2-211ENST00000496215 E7EQ34 232 aa19.89■□□□□ 0.77
COL9A2-211ENST00000496215 TERTO14746 1132 aaKnown RBP19.89■□□□□ 0.77
COL9A2-211ENST00000496215 VPS26AO75436 327 aa19.89■□□□□ 0.77
COL9A2-211ENST00000496215 SNRNP200O75643 2136 aaKnown RBP19.89■□□□□ 0.77
COL9A2-211ENST00000496215 HAUS5O94927 633 aa19.89■□□□□ 0.77
COL9A2-211ENST00000496215 CATP04040 527 aaKnown RBP19.89■□□□□ 0.77
COL9A2-211ENST00000496215 TCN2P20062 427 aa19.89■□□□□ 0.77
COL9A2-211ENST00000496215 MAGP20916 626 aa19.89■□□□□ 0.77
COL9A2-211ENST00000496215 C2orf54Q08AI8 447 aa19.89■□□□□ 0.77
COL9A2-211ENST00000496215 CUL1Q13616 776 aa19.89■□□□□ 0.77
COL9A2-211ENST00000496215 ZIC1Q15915 447 aa19.89■□□□□ 0.77
COL9A2-211ENST00000496215 TBR1Q16650 682 aa19.89■□□□□ 0.77
COL9A2-211ENST00000496215 HP1BP3Q5SSJ5 553 aaPredicted RBP19.89■□□□□ 0.77
COL9A2-211ENST00000496215 KIAA0408Q6ZU52 694 aa19.89■□□□□ 0.77
COL9A2-211ENST00000496215 NEK10Q6ZWH5 1172 aa19.89■□□□□ 0.77
COL9A2-211ENST00000496215 CNTN4Q8IWV2 1026 aa19.89■□□□□ 0.77
COL9A2-211ENST00000496215 GPR135Q8IZ08 494 aa19.89■□□□□ 0.77
COL9A2-211ENST00000496215 LMNTD1Q8N9Z9 388 aa19.89■□□□□ 0.77
COL9A2-211ENST00000496215 SPATA4Q8NEY3 305 aa19.89■□□□□ 0.77
COL9A2-211ENST00000496215 CATSPER2Q96P56 530 aa19.89■□□□□ 0.77
COL9A2-211ENST00000496215 GPR21Q99679 349 aa19.89■□□□□ 0.77
COL9A2-211ENST00000496215 SLC30A3Q99726 388 aa19.89■□□□□ 0.77
COL9A2-211ENST00000496215 AARSD1Q9BTE6 412 aaKnown RBP19.89■□□□□ 0.77
COL9A2-211ENST00000496215 HELZ2Q9BYK8 2649 aaKnown RBP19.89■□□□□ 0.77
COL9A2-211ENST00000496215 SLC7A5P2Q9GIP4 190 aa19.89■□□□□ 0.77
COL9A2-211ENST00000496215 ACTR5Q9H9F9 607 aaPredicted RBP19.89■□□□□ 0.77
COL9A2-211ENST00000496215 FAM60AQ9NP50 221 aa19.89■□□□□ 0.77
COL9A2-211ENST00000496215 PPANQ9NQ55 473 aaKnown RBP19.89■□□□□ 0.77
COL9A2-211ENST00000496215 INTS7Q9NVH2 962 aaKnown RBP19.89■□□□□ 0.77
COL9A2-211ENST00000496215 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.89■□□□□ 0.77
COL9A2-211ENST00000496215 MED16Q9Y2X0 877 aa19.89■□□□□ 0.77
COL9A2-211ENST00000496215 TLN1Q9Y490 2541 aaKnown RBP19.89■□□□□ 0.77
COL9A2-211ENST00000496215 FAM187AA6NFU0 413 aa19.88■□□□□ 0.77
COL9A2-211ENST00000496215 ARHGEF33A8MVX0 844 aa19.88■□□□□ 0.77
COL9A2-211ENST00000496215 NKX2-8O15522 239 aa19.88■□□□□ 0.77
COL9A2-211ENST00000496215 KATNA1O75449 491 aa19.88■□□□□ 0.77
COL9A2-211ENST00000496215 PSIP1O75475 530 aaKnown RBP19.88■□□□□ 0.77
COL9A2-211ENST00000496215 ENO3P13929 434 aaPredicted RBP19.88■□□□□ 0.77
COL9A2-211ENST00000496215 RPL21P46778 160 aaKnown RBP19.88■□□□□ 0.77
COL9A2-211ENST00000496215 GPS2Q13227 327 aa19.88■□□□□ 0.77
COL9A2-211ENST00000496215 CRTC2Q53ET0 693 aaPredicted RBP19.88■□□□□ 0.77
COL9A2-211ENST00000496215 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.88■□□□□ 0.77
COL9A2-211ENST00000496215 PRAMEF17Q5VTA0 474 aa19.88■□□□□ 0.77
COL9A2-211ENST00000496215 BORAQ6PGQ7 559 aa19.88■□□□□ 0.77
COL9A2-211ENST00000496215 MAATS1Q7Z4T9 603 aa19.88■□□□□ 0.77
COL9A2-211ENST00000496215 BBOF1Q8ND07 529 aa19.88■□□□□ 0.77
COL9A2-211ENST00000496215 HMGCLL1Q8TB92 370 aa19.88■□□□□ 0.77
COL9A2-211ENST00000496215 CD200R1Q8TD46 325 aa19.88■□□□□ 0.77
COL9A2-211ENST00000496215 DENND1AQ8TEH3 1009 aa19.88■□□□□ 0.77
COL9A2-211ENST00000496215 MR1Q95460 341 aa19.88■□□□□ 0.77
COL9A2-211ENST00000496215 LRFN5Q96NI6 719 aa19.88■□□□□ 0.77
COL9A2-211ENST00000496215 WDR83Q9BRX9 315 aaKnown RBP19.88■□□□□ 0.77
COL9A2-211ENST00000496215 AKIRIN1Q9H9L7 192 aaPredicted RBP19.88■□□□□ 0.77
COL9A2-211ENST00000496215 SNX24Q9Y343 169 aa19.88■□□□□ 0.77
COL9A2-211ENST00000496215 PCDHGA6Q9Y5G7 932 aa19.88■□□□□ 0.77
COL9A2-211ENST00000496215 TEX264Q9Y6I9 313 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms