RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 NFE2L1Q14494 772 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 E2F5Q15329 346 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 SYT14P1Q58G82 188 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 CCDC158Q5M9N0 1113 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 LINGO4Q6UY18 593 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 TMEM182Q6ZP80 229 aaPredicted RBP3.48□□□□□ -1.85
CLK1-214ENST00000496205 ANO5Q75V66 913 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 NUP54Q7Z3B4 507 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 TLK2Q86UE8 772 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 SFR1Q86XK3 245 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 HSCBQ8IWL3 235 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 NUP93Q8N1F7 819 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 TMCO5AQ8N6Q1 288 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 BMPERQ8N8U9 685 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 TRIML1Q8N9V2 468 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 GDAP1Q8TB36 358 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 RNF128Q8TEB7 428 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 SSMEM1Q8WWF3 244 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 ST6GALNAC6Q969X2 333 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 RTP4Q96DX8 246 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 MTERF3Q96E29 417 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 C17orf77Q96MU5 243 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 SFXN2Q96NB2 322 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 SPAG5Q96R06 1193 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 CITED2Q99967 270 aaPredicted RBP3.48□□□□□ -1.85
CLK1-214ENST00000496205 POLR3CQ9BUI4 534 aaPredicted RBP3.48□□□□□ -1.85
CLK1-214ENST00000496205 DNAI2Q9GZS0 605 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 PFDN4Q9NQP4 134 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 PA2G4Q9UQ80 394 aaKnown RBP3.48□□□□□ -1.85
CLK1-214ENST00000496205 GRIP1Q9Y3R0 1128 aa3.48□□□□□ -1.85
CLK1-214ENST00000496205 SAA2-SAA4A0A096LPE2 208 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 ARHGEF37A1IGU5 675 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 NEMP2A6NFY4 417 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 PRAC2D3DTV9 90 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 H0YAE9 185 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 CPLX1O14810 134 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 STX6O43752 255 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 TSPAN1O60635 241 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 SLU7O95391 586 aaKnown RBP3.47□□□□□ -1.85
CLK1-214ENST00000496205 IGHV2-70P01814 119 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 SERPINB2P05120 415 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 SNRNP70P08621 437 aaKnown RBP3.47□□□□□ -1.85
CLK1-214ENST00000496205 SUPT20HL2P0C7V6 817 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 HAPLN1P10915 354 aaPredicted RBP3.47□□□□□ -1.85
CLK1-214ENST00000496205 LBPP18428 481 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 CD27P26842 260 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 TCF7P36402 384 aaPredicted RBP3.47□□□□□ -1.85
CLK1-214ENST00000496205 LHX1P48742 406 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 ZNF131P52739 623 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 ZNF132P52740 706 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 CAPZA1P52907 286 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 BPIFB3P59826 476 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 TUBB4BP68371 445 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 PRKCZQ05513 592 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 ZNF415Q09FC8 603 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 MFAP5Q13361 173 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 CA9Q16790 459 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 UGP2Q16851 508 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 MDH1BQ5I0G3 518 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 MFSD12Q6NUT3 480 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 PET117Q6UWS5 81 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 DET1Q7L5Y6 550 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 OTOAQ7RTW8 1153 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 PIWIL3Q7Z3Z3 882 aaKnown RBP3.47□□□□□ -1.85
CLK1-214ENST00000496205 ARHGAP22Q7Z5H3 698 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 ADCK2Q7Z695 626 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 LCA5Q86VQ0 697 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 LONP2Q86WA8 852 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 MFN1Q8IWA4 741 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 CARNMT1Q8N4J0 409 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 NPEPL1Q8NDH3 523 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 SETD6Q8TBK2 473 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 EXOC4Q96A65 974 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 IL17FQ96PD4 163 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 TSPAN18Q96SJ8 248 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 SEPHS2Q99611 448 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 RAD9AQ99638 391 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 NEURL2Q9BR09 285 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 SLC2A11Q9BYW1 496 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 XPO4Q9C0E2 1151 aaKnown RBP3.47□□□□□ -1.85
CLK1-214ENST00000496205 TSPY26PQ9H489 355 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 A4GALTQ9NPC4 353 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 ZNF701Q9NV72 531 aaPredicted RBP3.47□□□□□ -1.85
CLK1-214ENST00000496205 COQ3Q9NZJ6 369 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 POLLQ9UGP5 575 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 TMCC3Q9ULS5 477 aa3.47□□□□□ -1.85
CLK1-214ENST00000496205 E9PI62 339 aa3.46□□□□□ -1.86
CLK1-214ENST00000496205 CLDN4O14493 209 aa3.46□□□□□ -1.86
CLK1-214ENST00000496205 GAPDHSO14556 408 aaPredicted RBP3.46□□□□□ -1.86
CLK1-214ENST00000496205 BUB3O43684 328 aa3.46□□□□□ -1.86
CLK1-214ENST00000496205 BUD23O43709 281 aaKnown RBP3.46□□□□□ -1.86
CLK1-214ENST00000496205 CTSVO60911 334 aa3.46□□□□□ -1.86
CLK1-214ENST00000496205 SIX3O95343 332 aaPredicted RBP3.46□□□□□ -1.86
CLK1-214ENST00000496205 PAK4O96013 591 aaPredicted RBP3.46□□□□□ -1.86
CLK1-214ENST00000496205 CDC25CP30307 473 aa3.46□□□□□ -1.86
CLK1-214ENST00000496205 KIF5BP33176 963 aa3.46□□□□□ -1.86
CLK1-214ENST00000496205 KCNJ1P48048 391 aa3.46□□□□□ -1.86
CLK1-214ENST00000496205 SLC9A3P48764 834 aa3.46□□□□□ -1.86
CLK1-214ENST00000496205 BMXP51813 675 aa3.46□□□□□ -1.86
CLK1-214ENST00000496205 MORF4L2Q15014 288 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms