RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 SNRNP40Q96DI7 357 aaKnown RBP22.35■■□□□ 1.17
COL27A1-208ENST00000494780 BAG1Q99933 345 aaPredicted RBP22.35■■□□□ 1.17
COL27A1-208ENST00000494780 CARD6Q9BX69 1037 aa22.35■■□□□ 1.17
COL27A1-208ENST00000494780 FRMD8P1Q9BZ68 369 aaPredicted RBP22.35■■□□□ 1.17
COL27A1-208ENST00000494780 ZNF552Q9H707 407 aaPredicted RBP22.35■■□□□ 1.17
COL27A1-208ENST00000494780 CASS4Q9NQ75 786 aa22.35■■□□□ 1.17
COL27A1-208ENST00000494780 GPC4O75487 556 aa22.34■■□□□ 1.17
COL27A1-208ENST00000494780 UMODP07911 640 aa22.34■■□□□ 1.17
COL27A1-208ENST00000494780 ATXN8OSP0DMR3 200 aa22.34■■□□□ 1.17
COL27A1-208ENST00000494780 MAGP20916 626 aa22.34■■□□□ 1.17
COL27A1-208ENST00000494780 GCGRP47871 477 aa22.34■■□□□ 1.17
COL27A1-208ENST00000494780 ARSFP54793 590 aa22.34■■□□□ 1.17
COL27A1-208ENST00000494780 HSPA14Q0VDF9 509 aa22.34■■□□□ 1.17
COL27A1-208ENST00000494780 CYP2A13Q16696 494 aa22.34■■□□□ 1.17
COL27A1-208ENST00000494780 FASTKD1Q53R41 847 aaKnown RBP22.34■■□□□ 1.17
COL27A1-208ENST00000494780 MCATQ8IVS2 390 aaKnown RBP22.34■■□□□ 1.17
COL27A1-208ENST00000494780 LINC01555Q8NAE3 123 aa22.34■■□□□ 1.17
COL27A1-208ENST00000494780 OR6P1Q8NGX9 317 aa22.34■■□□□ 1.17
COL27A1-208ENST00000494780 TM9SF4Q92544 642 aa22.34■■□□□ 1.17
COL27A1-208ENST00000494780 PEX13Q92968 403 aa22.34■■□□□ 1.17
COL27A1-208ENST00000494780 C19orf60Q96EN9 201 aa22.34■■□□□ 1.17
COL27A1-208ENST00000494780 MENTQ9BUN1 341 aa22.34■■□□□ 1.17
COL27A1-208ENST00000494780 ATP13A2Q9NQ11 1180 aa22.34■■□□□ 1.17
COL27A1-208ENST00000494780 NBPF19A0A087WUL8 3843 aa22.33■■□□□ 1.17
COL27A1-208ENST00000494780 E7EVH7 732 aa22.33■■□□□ 1.17
COL27A1-208ENST00000494780 LIASO43766 372 aa22.33■■□□□ 1.17
COL27A1-208ENST00000494780 KRT86O43790 486 aa22.33■■□□□ 1.17
COL27A1-208ENST00000494780 APOA4P06727 396 aa22.33■■□□□ 1.17
COL27A1-208ENST00000494780 CD9P21926 228 aa22.33■■□□□ 1.17
COL27A1-208ENST00000494780 ALAS2P22557 587 aa22.33■■□□□ 1.17
COL27A1-208ENST00000494780 GRIA1P42261 906 aa22.33■■□□□ 1.17
COL27A1-208ENST00000494780 PRAMEP78395 509 aa22.33■■□□□ 1.17
COL27A1-208ENST00000494780 OASLQ15646 514 aaKnown RBP22.33■■□□□ 1.17
COL27A1-208ENST00000494780 HIST2H2BCQ6DN03 193 aa22.33■■□□□ 1.17
COL27A1-208ENST00000494780 UNC5DQ6UXZ4 953 aa22.33■■□□□ 1.17
COL27A1-208ENST00000494780 VRK3Q8IV63 474 aa22.33■■□□□ 1.17
COL27A1-208ENST00000494780 DCUN1D3Q8IWE4 304 aa22.33■■□□□ 1.17
COL27A1-208ENST00000494780 FAM20CQ8IXL6 584 aa22.33■■□□□ 1.17
COL27A1-208ENST00000494780 PRR7Q8TB68 274 aa22.33■■□□□ 1.17
COL27A1-208ENST00000494780 FKBP10Q96AY3 582 aa22.33■■□□□ 1.17
COL27A1-208ENST00000494780 ZNF778Q96MU6 729 aa22.33■■□□□ 1.17
COL27A1-208ENST00000494780 SLC22A11Q9NSA0 550 aa22.33■■□□□ 1.17
COL27A1-208ENST00000494780 INTS7Q9NVH2 962 aaKnown RBP22.33■■□□□ 1.17
COL27A1-208ENST00000494780 CCDC88CQ9P219 2028 aa22.33■■□□□ 1.16
COL27A1-208ENST00000494780 SNRNP200O75643 2136 aaKnown RBP22.33■■□□□ 1.16
COL27A1-208ENST00000494780 A0A1B0GX78 115 aa22.32■■□□□ 1.16
COL27A1-208ENST00000494780 AGPSO00116 658 aa22.32■■□□□ 1.16
COL27A1-208ENST00000494780 ONECUT2O95948 504 aa22.32■■□□□ 1.16
COL27A1-208ENST00000494780 S1PR4O95977 384 aa22.32■■□□□ 1.16
COL27A1-208ENST00000494780 IFNB1P01574 187 aa22.32■■□□□ 1.16
COL27A1-208ENST00000494780 RNF224P0DH78 156 aa22.32■■□□□ 1.16
COL27A1-208ENST00000494780 PIM1P11309 404 aaPredicted RBP22.32■■□□□ 1.16
COL27A1-208ENST00000494780 SEMA3AQ14563 771 aa22.32■■□□□ 1.16
COL27A1-208ENST00000494780 AARS2Q5JTZ9 985 aaKnown RBP22.32■■□□□ 1.16
COL27A1-208ENST00000494780 ZADH2Q8N4Q0 377 aa22.32■■□□□ 1.16
COL27A1-208ENST00000494780 OR2L8Q8NGY9 312 aa22.32■■□□□ 1.16
COL27A1-208ENST00000494780 LKAAEAR1Q8TD35 194 aa22.32■■□□□ 1.16
COL27A1-208ENST00000494780 ILKAPQ9H0C8 392 aaPredicted RBP22.32■■□□□ 1.16
COL27A1-208ENST00000494780 ASF1BQ9NVP2 202 aa22.32■■□□□ 1.16
COL27A1-208ENST00000494780 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.32■■□□□ 1.16
COL27A1-208ENST00000494780 ANAPC5Q9UJX4 755 aa22.32■■□□□ 1.16
COL27A1-208ENST00000494780 KLHL20Q9Y2M5 609 aa22.32■■□□□ 1.16
COL27A1-208ENST00000494780 TCAF1Q9Y4C2 921 aa22.32■■□□□ 1.16
COL27A1-208ENST00000494780 UNC79Q9P2D8 2635 aa22.32■■□□□ 1.16
COL27A1-208ENST00000494780 PRRC2CQ9Y520 2896 aaKnown RBP22.31■■□□□ 1.16
COL27A1-208ENST00000494780 SLCO2B1O94956 709 aa22.31■■□□□ 1.16
COL27A1-208ENST00000494780 CBX6O95503 412 aa22.31■■□□□ 1.16
COL27A1-208ENST00000494780 ALBP02768 609 aa22.31■■□□□ 1.16
COL27A1-208ENST00000494780 FOXL2P58012 376 aa22.31■■□□□ 1.16
COL27A1-208ENST00000494780 AIMP2Q13155 320 aaKnown RBP22.31■■□□□ 1.16
COL27A1-208ENST00000494780 GRB7Q14451 532 aa22.31■■□□□ 1.16
COL27A1-208ENST00000494780 TMED2Q15363 201 aa22.31■■□□□ 1.16
COL27A1-208ENST00000494780 NR6A1Q15406 480 aa22.31■■□□□ 1.16
COL27A1-208ENST00000494780 ZC3H12BQ5HYM0 836 aaKnown RBP22.31■■□□□ 1.16
COL27A1-208ENST00000494780 SEL1L2Q5TEA6 688 aa22.31■■□□□ 1.16
COL27A1-208ENST00000494780 YOD1Q5VVQ6 348 aaPredicted RBP22.31■■□□□ 1.16
COL27A1-208ENST00000494780 TTLL10Q6ZVT0 673 aa22.31■■□□□ 1.16
COL27A1-208ENST00000494780 OVCH1Q7RTY7 1134 aa22.31■■□□□ 1.16
COL27A1-208ENST00000494780 LURAP1LQ8IV03 231 aa22.31■■□□□ 1.16
COL27A1-208ENST00000494780 TMEM139Q8IV31 216 aa22.31■■□□□ 1.16
COL27A1-208ENST00000494780 CISD2Q8N5K1 135 aaKnown RBP22.31■■□□□ 1.16
COL27A1-208ENST00000494780 CFAP61Q8NHU2 1237 aa22.31■■□□□ 1.16
COL27A1-208ENST00000494780 WDR54Q9H977 334 aa22.31■■□□□ 1.16
COL27A1-208ENST00000494780 RAB6BQ9NRW1 208 aa22.31■■□□□ 1.16
COL27A1-208ENST00000494780 ZNF148Q9UQR1 794 aa22.31■■□□□ 1.16
COL27A1-208ENST00000494780 HIVEP3Q5T1R4 2406 aa22.31■■□□□ 1.16
COL27A1-208ENST00000494780 A0A0U1RQJ8 604 aa22.3■■□□□ 1.16
COL27A1-208ENST00000494780 IQCF5A8MTL0 148 aa22.3■■□□□ 1.16
COL27A1-208ENST00000494780 PRMT5O14744 637 aaPredicted RBP22.3■■□□□ 1.16
COL27A1-208ENST00000494780 RASGRF2O14827 1237 aa22.3■■□□□ 1.16
COL27A1-208ENST00000494780 FKBP9O95302 570 aa22.3■■□□□ 1.16
COL27A1-208ENST00000494780 ITGAXP20702 1163 aa22.3■■□□□ 1.16
COL27A1-208ENST00000494780 MMP11P24347 488 aa22.3■■□□□ 1.16
COL27A1-208ENST00000494780 AOAHP28039 575 aa22.3■■□□□ 1.16
COL27A1-208ENST00000494780 TCTE1Q5JU00 501 aa22.3■■□□□ 1.16
COL27A1-208ENST00000494780 Q6ZS92 163 aa22.3■■□□□ 1.16
COL27A1-208ENST00000494780 TMEM151BQ8IW70 566 aa22.3■■□□□ 1.16
COL27A1-208ENST00000494780 PPHLN1Q8NEY8 458 aaKnown RBP22.3■■□□□ 1.16
COL27A1-208ENST00000494780 IL17FQ96PD4 163 aa22.3■■□□□ 1.16
COL27A1-208ENST00000494780 DESI2Q9BSY9 194 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms