RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 CCNYL3P0C7X3 344 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 HOXB8P17481 243 aaPredicted RBP4.69□□□□□ -1.66
PRKD3-210ENST00000494667 HOXB9P17482 250 aaPredicted RBP4.69□□□□□ -1.66
PRKD3-210ENST00000494667 TNNI1P19237 187 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 MSH3P20585 1137 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 YWHAQP27348 245 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 CRKLP46109 303 aaKnown RBP4.69□□□□□ -1.66
PRKD3-210ENST00000494667 GZMMP51124 257 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 SUOXP51687 545 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 DGKQP52824 942 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 ZNF91Q05481 1191 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 PWP1Q13610 501 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 ZNF169Q14929 603 aaPredicted RBP4.69□□□□□ -1.66
PRKD3-210ENST00000494667 KIAA0040Q15053 153 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 KLHL12Q53G59 568 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 UNC50Q53HI1 259 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 PABPC1L2AQ5JQF8 200 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 KIAA1614Q5VZ46 1190 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 CORO6Q6QEF8 472 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 KDELC1Q6UW63 502 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 LCLAT1Q6UWP7 414 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 TMEM179BQ7Z7N9 219 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 RNF180Q86T96 592 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 RASAL3Q86YV0 1011 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 RNF113BQ8IZP6 322 aaKnown RBP4.69□□□□□ -1.66
PRKD3-210ENST00000494667 ZNF557Q8N988 423 aaPredicted RBP4.69□□□□□ -1.66
PRKD3-210ENST00000494667 DTX3Q8N9I9 347 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 UXS1Q8NBZ7 420 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 HEXDCQ8WVB3 486 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 SGTBQ96EQ0 304 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 SLC47A1Q96FL8 570 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 ZNF583Q96ND8 569 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 TOX2Q96NM4 488 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 RTP3Q9BQQ7 232 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 TBCDQ9BTW9 1192 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 PRR14Q9BWN1 585 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 GAREM1Q9H706 876 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 UCKL1Q9NWZ5 548 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 EMC3Q9P0I2 261 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 FAM8A1Q9UBU6 413 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 REV1Q9UBZ9 1251 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 ZFR2Q9UPR6 939 aaKnown RBP4.69□□□□□ -1.66
PRKD3-210ENST00000494667 HRH3Q9Y5N1 445 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 DNAJC15Q9Y5T4 150 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 ALG5Q9Y673 324 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 CLCA1A8K7I4 914 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 F8W036 122 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 I3L521 148 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 POLRMTO00411 1230 aaKnown RBP4.69□□□□□ -1.66
PRKD3-210ENST00000494667 CHMP2AO43633 222 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 ERN1O75460 977 aaKnown RBP4.69□□□□□ -1.66
PRKD3-210ENST00000494667 FADS2O95864 444 aaKnown RBP4.69□□□□□ -1.66
PRKD3-210ENST00000494667 CST1P01037 141 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 NFKB1P19838 968 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 IGFBP5P24593 272 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 TGFBR1P36897 503 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 KCNK10P57789 538 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 FPGSQ05932 587 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 ABRQ12979 859 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 LARS2Q15031 903 aaKnown RBP4.69□□□□□ -1.66
PRKD3-210ENST00000494667 FAM83EQ2M2I3 478 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 GPR33Q49SQ1 333 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 RABL3Q5HYI8 236 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 PAGE3Q5JUK9 113 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 CCDC71Q8IV32 467 aaPredicted RBP4.69□□□□□ -1.66
PRKD3-210ENST00000494667 CYP4Z2PQ8N1L4 340 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 CAMKVQ8NCB2 501 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 PLA2G15Q8NCC3 412 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 ZBTB44Q8NCP5 570 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 CLRN3Q8NCR9 226 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 ARRDC4Q8NCT1 418 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 ZNF540Q8NDQ6 660 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 DMBX1Q8NFW5 382 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 NLGN4YQ8NFZ3 816 aaPredicted RBP4.69□□□□□ -1.66
PRKD3-210ENST00000494667 OR5B17Q8NGF7 314 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 RHEBL1Q8TAI7 183 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 NXPE2Q96DL1 559 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 TRMT61AQ96FX7 289 aaKnown RBP4.69□□□□□ -1.66
PRKD3-210ENST00000494667 TSGA13Q96PP4 275 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 PPP1R2P1Q96PQ5 205 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 PITHD1Q9GZP4 211 aaPredicted RBP4.69□□□□□ -1.66
PRKD3-210ENST00000494667 FANCFQ9NPI8 374 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 IMP3Q9NV31 184 aaKnown RBP4.69□□□□□ -1.66
PRKD3-210ENST00000494667 ASIC5Q9NY37 505 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 KCMF1Q9P0J7 381 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 TJP2Q9UDY2 1190 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 UBQLN2Q9UHD9 624 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 SLC39A10Q9ULF5 831 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 KLHL20Q9Y2M5 609 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 PTGES3LE9PB15 166 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 CILPO75339 1184 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 SCO1O75880 301 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 MICAL2O94851 1124 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 LTA4HP09960 611 aaKnown RBP4.69□□□□□ -1.66
PRKD3-210ENST00000494667 BRCC3P46736 316 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 KCNQ1P51787 676 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 AIF1P55008 147 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 RAG2P55895 527 aa4.69□□□□□ -1.66
PRKD3-210ENST00000494667 LSM3P62310 102 aaKnown RBP4.69□□□□□ -1.66
PRKD3-210ENST00000494667 CAPRIN1Q14444 709 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms