RNA–Protein interactions for RNA: ENST00000494573.6

LDHA-211, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,154 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-211ENST00000494573 HMGCS1Q01581 520 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 PCDH1Q08174 1060 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 CYP4F3Q08477 520 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 CSTF3Q12996 717 aaKnown RBP10.93□□□□□ -0.66
LDHA-211ENST00000494573 SELPLGQ14242 412 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 NRF1Q16656 503 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 PTCHD3Q3KNS1 767 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 RUNDC3AQ59EK9 446 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 SGO1Q5FBB7 561 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 LRRC73Q5JTD7 316 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 HABP4Q5JVS0 413 aaKnown RBP10.93□□□□□ -0.66
LDHA-211ENST00000494573 LIPJQ5W064 366 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 ATG9BQ674R7 924 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 ERAP2Q6P179 960 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 NEK5Q6P3R8 708 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 SUSD1Q6UWL2 747 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 SERPINA13PQ6UXR4 307 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 Q6ZVL8 140 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 ZNF765Q7L2R6 523 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 GRASPQ7Z6J2 395 aaPredicted RBP10.93□□□□□ -0.66
LDHA-211ENST00000494573 EPHX4Q8IUS5 362 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 RIMKLAQ8IXN7 391 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 NAT16Q8N8M0 369 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 ZNF784Q8NCA9 323 aaPredicted RBP10.93□□□□□ -0.66
LDHA-211ENST00000494573 FAM110BQ8TC76 370 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 BPIFB1Q8TDL5 484 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 NCSTNQ92542 709 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 BADQ92934 168 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 TESCQ96BS2 214 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 PPM1MQ96MI6 270 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 ZSWIM3Q96MP5 696 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 RIOK2Q9BVS4 552 aaKnown RBP10.93□□□□□ -0.66
LDHA-211ENST00000494573 TRIM8Q9BZR9 551 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 KCNH6Q9H252 994 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 ELOVL6Q9H5J4 265 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 EPHX3Q9H6B9 360 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 RPF2Q9H7B2 306 aaKnown RBP10.93□□□□□ -0.66
LDHA-211ENST00000494573 GORASP2Q9H8Y8 452 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 PRKAG2Q9UGJ0 569 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 ZNF639Q9UID6 485 aa10.93□□□□□ -0.66
LDHA-211ENST00000494573 MBD1Q9UIS9 605 aaPredicted RBP10.93□□□□□ -0.66
LDHA-211ENST00000494573 PCM1Q15154 2024 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 A0A096LPI6 279 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 SLC5A10A0PJK1 596 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 ARHGAP10A1A4S6 786 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 FADS2P1A8MWK0 482 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 FAM220BPB1ANY3 271 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 H0Y858 1186 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 DFNA5O60443 496 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 PRMT3O60678 531 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 ATG13O75143 517 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 SCELO95171 688 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 PAPLNO95428 1278 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 CLPTM1O96005 669 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 LDLRP01130 860 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 PRNPP04156 253 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 PGRP06401 933 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 HSD3B1P14060 373 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 NCK1P16333 377 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 HOXB6P17509 224 aaKnown RBP10.92□□□□□ -0.66
LDHA-211ENST00000494573 CKMT2P17540 419 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 MYF6P23409 242 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 HSD3B2P26439 372 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 ETV3P41162 512 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 CCR3P51677 355 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 SH3BGRP55822 239 aaPredicted RBP10.92□□□□□ -0.66
LDHA-211ENST00000494573 MTPNP58546 118 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 PFN3P60673 137 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 PTGR1Q14914 329 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 CPSF6Q16630 551 aaKnown RBP eCLIP10.92□□□□□ -0.66
LDHA-211ENST00000494573 ZXDCQ2QGD7 858 aaPredicted RBP10.92□□□□□ -0.66
LDHA-211ENST00000494573 CNPY1Q3B7I2 92 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 FAM174BQ3ZCQ3 159 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 SYTL3Q4VX76 610 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 NHSL2Q5HYW2 709 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 SPANXN4Q5MJ08 99 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 LRIF1Q5T3J3 769 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 LIPIQ6XZB0 460 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 CYP2U1Q7Z449 544 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 RALGPS2Q86X27 583 aaPredicted RBP10.92□□□□□ -0.66
LDHA-211ENST00000494573 SKA2Q8WVK7 121 aaPredicted RBP10.92□□□□□ -0.66
LDHA-211ENST00000494573 TFAP2CQ92754 450 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 SCAMP4Q969E2 229 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 GLYATL1Q969I3 302 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 ZNF707Q96C28 371 aaPredicted RBP10.92□□□□□ -0.66
LDHA-211ENST00000494573 METTL2AQ96IZ6 378 aaKnown RBP10.92□□□□□ -0.66
LDHA-211ENST00000494573 CCDC138Q96M89 665 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 ZNF583Q96ND8 569 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 HHIPQ96QV1 700 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 P2RY13Q9BPV8 354 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 CCM2Q9BSQ5 444 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 HAUS8Q9BT25 410 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 RMND5AQ9H871 391 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 ZFP14Q9HCL3 533 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.92□□□□□ -0.66
LDHA-211ENST00000494573 ZNHIT2Q9UHR6 403 aa10.92□□□□□ -0.66
LDHA-211ENST00000494573 MRPS23Q9Y3D9 190 aaKnown RBP10.92□□□□□ -0.66
LDHA-211ENST00000494573 H3BNH8 94 aa10.91□□□□□ -0.66
LDHA-211ENST00000494573 WNT9AO14904 365 aa10.91□□□□□ -0.66
LDHA-211ENST00000494573 PER2O15055 1255 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms