RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 PSD4Q8NDX1 1056 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 SLC25A43Q8WUT9 341 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-219ENST00000494323 NT5C3BQ969T7 300 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 TSACCQ96A04 125 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-219ENST00000494323 GRAMD1AQ96CP6 724 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 CFAP57Q96MR6 1250 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 TIGD1Q96MW7 591 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 LENG8Q96PV6 779 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-219ENST00000494323 WRAP53Q9BUR4 548 aaKnown RBP5.17□□□□□ -1.58
PTCD3-219ENST00000494323 LRRC61Q9BV99 259 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 PDCL3Q9H2J4 239 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 ZNF768Q9H5H4 540 aaKnown RBP5.17□□□□□ -1.58
PTCD3-219ENST00000494323 EPB41L5Q9HCM4 733 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 GALNT9Q9HCQ5 603 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 TBC1D23Q9NUY8 699 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 NCKIPSDQ9NZQ3 722 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 APOBEC3BQ9UH17 382 aaKnown RBP5.17□□□□□ -1.58
PTCD3-219ENST00000494323 HOOK1Q9UJC3 728 aaKnown RBP5.17□□□□□ -1.58
PTCD3-219ENST00000494323 GTF2A1LQ9UNN4 478 aa5.17□□□□□ -1.58
PTCD3-219ENST00000494323 HEMK1Q9Y5R4 338 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-219ENST00000494323 COL27A1Q8IZC6 1860 aaPredicted RBP5.17□□□□□ -1.58
PTCD3-219ENST00000494323 BOD1L1Q8NFC6 3051 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 FLNCQ14315 2725 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 IGLV3-10A0A075B6K4 115 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 CCDC187A0A096LP49 1063 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 FAM72CH0Y354 149 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 NTN3O00634 580 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-219ENST00000494323 FZD7O75084 574 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 VPS4BO75351 444 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 TM7SF2O76062 418 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 SUN1O94901 812 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 NDUFA10O95299 355 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 F9P00740 461 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 RPLP0P05388 317 aaKnown RBP5.16□□□□□ -1.58
PTCD3-219ENST00000494323 ITGA2BP08514 1039 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 CTSEP14091 401 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 ITGB6P18564 788 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 ITIH1P19827 911 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 RPS7P62081 194 aaKnown RBP5.16□□□□□ -1.58
PTCD3-219ENST00000494323 SLC25A3Q00325 362 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 MTA1Q13330 715 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 MEA1Q16626 185 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 KLHL40Q2TBA0 621 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 SLC25A52Q3SY17 297 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 ZIK1Q3SY52 487 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-219ENST00000494323 COLEC12Q5KU26 742 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 FAM72AQ5TYM5 149 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 TAF3Q5VWG9 929 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 KCTD16Q68DU8 428 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 FAM72DQ6L9T8 149 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 TRNP1Q6NT89 227 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 RWDD4Q6NW29 188 aaKnown RBP5.16□□□□□ -1.58
PTCD3-219ENST00000494323 JMJD6Q6NYC1 403 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-219ENST00000494323 ENPP7Q6UWV6 458 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 GDPD4Q6W3E5 623 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 GBP6Q6ZN66 633 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 KIAA0408Q6ZU52 694 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 VASH2Q86V25 355 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 FAM72BQ86X60 149 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 FAM131BQ86XD5 332 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 ZFAND4Q86XD8 727 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 PCDH20Q8N6Y1 951 aaKnown RBP5.16□□□□□ -1.58
PTCD3-219ENST00000494323 EMC1Q8N766 993 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 ZNF397Q8NF99 534 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-219ENST00000494323 FAM71BQ8TC56 605 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 STT3BQ8TCJ2 826 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 ZNF483Q8TF39 744 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-219ENST00000494323 STYXQ8WUJ0 223 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 IPCEF1Q8WWN9 437 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-219ENST00000494323 SHC3Q92529 594 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 ARHGEF2Q92974 986 aaKnown RBP5.16□□□□□ -1.58
PTCD3-219ENST00000494323 FUBP1Q96AE4 644 aaKnown RBP5.16□□□□□ -1.58
PTCD3-219ENST00000494323 VOPP1Q96AW1 172 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 TBC1D20Q96BZ9 403 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 RNF31Q96EP0 1072 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 SGF29Q96ES7 293 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 PLEKHG4BQ96PX9 1271 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 GFM1Q96RP9 751 aaKnown RBP5.16□□□□□ -1.58
PTCD3-219ENST00000494323 HAPLN3Q96S86 360 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 ZNF747Q9BV97 191 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 ALOXE3Q9BYJ1 711 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 ZYG11BQ9C0D3 744 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 PISDQ9UG56 409 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 OR12D3Q9UGF7 316 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 DNAJC12Q9UKB3 198 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 STAP1Q9ULZ2 295 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 GPR34Q9UPC5 381 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 SHOC2Q9UQ13 582 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 ZFC3H1O60293 1989 aaKnown RBP5.16□□□□□ -1.58
PTCD3-219ENST00000494323 CHD5Q8TDI0 1954 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 LRRK1Q38SD2 2015 aa5.16□□□□□ -1.58
PTCD3-219ENST00000494323 RP1L1Q8IWN7 2480 aaPredicted RBP5.16□□□□□ -1.58
PTCD3-219ENST00000494323 LOC102723971A0A1B0GUV8 181 aa5.15□□□□□ -1.59
PTCD3-219ENST00000494323 TMEM200CA6NKL6 621 aa5.15□□□□□ -1.59
PTCD3-219ENST00000494323 INSIG1O15503 277 aa5.15□□□□□ -1.59
PTCD3-219ENST00000494323 CCP110O43303 1012 aa5.15□□□□□ -1.59
PTCD3-219ENST00000494323 SUV39H1O43463 412 aa5.15□□□□□ -1.59
PTCD3-219ENST00000494323 BUB1O43683 1085 aa5.15□□□□□ -1.59
PTCD3-219ENST00000494323 RASSF9O75901 435 aa5.15□□□□□ -1.59
PTCD3-219ENST00000494323 TNFRSF6BO95407 300 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms