RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 TRIM54Q9BYV2 358 aa13.45□□□□□ -0.26
VCP-207ENST00000493886 ARL15Q9NXU5 204 aa13.45□□□□□ -0.26
VCP-207ENST00000493886 EBF1Q9UH73 591 aa13.45□□□□□ -0.26
VCP-207ENST00000493886 SLC8A2Q9UPR5 921 aa13.45□□□□□ -0.26
VCP-207ENST00000493886 PDE10AQ9Y233 779 aa13.45□□□□□ -0.26
VCP-207ENST00000493886 PCDHA9Q9Y5H5 950 aa13.45□□□□□ -0.26
VCP-207ENST00000493886 FFAR3O14843 346 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 MAGEB3O15480 346 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 GPR42O15529 346 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 MTX2O75431 263 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 G6PDP11413 515 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 TIMP2P16035 220 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 SYN1P17600 705 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 MSH3P20585 1137 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 PSMA4P25789 261 aaKnown RBP13.44□□□□□ -0.26
VCP-207ENST00000493886 SH3BGRP55822 239 aaPredicted RBP13.44□□□□□ -0.26
VCP-207ENST00000493886 PRKG2Q13237 762 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 GBX1Q14549 363 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 INAQ16352 499 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 Q6ZVL8 140 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 UBE2R2Q712K3 238 aaPredicted RBP13.44□□□□□ -0.26
VCP-207ENST00000493886 ZFAND4Q86XD8 727 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 ADI1Q9BV57 179 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 RSPH9Q9H1X1 276 aaPredicted RBP13.44□□□□□ -0.26
VCP-207ENST00000493886 FBXO10Q9UK96 956 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 CDC14AQ9UNH5 594 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 CCL27Q9Y4X3 112 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 TSPAN11A1L157 253 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 LOC730098B7Z3J9 87 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 C5orf67F2Z3F1 127 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 EI24O14681 340 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 NUAK1O60285 661 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 CYP17A1P05093 508 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 EBLN1P0CF75 366 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 RFTN2Q52LD8 501 aaPredicted RBP13.44□□□□□ -0.26
VCP-207ENST00000493886 CDKL4Q5MAI5 379 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 CYP20A1Q6UW02 462 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 SERPINA13PQ6UXR4 307 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 C11orf74Q86VG3 221 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 ITFG1Q8TB96 612 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 SKA2Q8WVK7 121 aaPredicted RBP13.44□□□□□ -0.26
VCP-207ENST00000493886 GAB3Q8WWW8 586 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 PPP3R2Q96LZ3 170 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 ANKRD60Q9BZ19 345 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 KLQ9UEF7 1012 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 IL36AQ9UHA7 158 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 TRPS1Q9UHF7 1281 aa13.44□□□□□ -0.26
VCP-207ENST00000493886 POLR3HQ9Y535 204 aaPredicted RBP13.44□□□□□ -0.26
VCP-207ENST00000493886 DLGAP1O14490 977 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 C8GP07360 202 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 MYOGP15173 224 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 ETV3P41162 512 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 DGKGP49619 791 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 DCDC1P59894 354 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 BNIP2Q12982 314 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 BOP1Q14137 746 aaKnown RBP13.43□□□□□ -0.26
VCP-207ENST00000493886 VRK3Q8IV63 474 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 TFAP2CQ92754 450 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 ZUFSPQ96AP4 578 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 TMEM125Q96AQ2 219 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 SLC12A9Q9BXP2 914 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 CLK4Q9HAZ1 481 aaKnown RBP13.43□□□□□ -0.26
VCP-207ENST00000493886 PARVBQ9HBI1 364 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 CFAP99D6REC4 459 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 RGS14O43566 566 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 WDR47O94967 919 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 ENO2P09104 434 aaPredicted RBP13.43□□□□□ -0.26
VCP-207ENST00000493886 CISD3P0C7P0 127 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 XPAP23025 273 aaPredicted RBP13.43□□□□□ -0.26
VCP-207ENST00000493886 CTBSQ01459 385 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 EIF2B5Q13144 721 aaKnown RBP13.43□□□□□ -0.26
VCP-207ENST00000493886 PLCL1Q15111 1095 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 POM121L1PQ3SYA9 428 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 ZNF805Q5CZA5 627 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 TCEAL5Q5H9L2 206 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 FAM209AQ5JX71 171 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 RBM23Q86U06 439 aaKnown RBP13.43□□□□□ -0.26
VCP-207ENST00000493886 CELF5Q8N6W0 485 aaKnown RBP13.43□□□□□ -0.26
VCP-207ENST00000493886 ZNF366Q8N895 744 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 C7orf57Q8NEG2 295 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 ACTL8Q9H568 366 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 SLC32A1Q9H598 525 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 FARSBQ9NSD9 589 aaKnown RBP13.43□□□□□ -0.26
VCP-207ENST00000493886 CCM2LQ9NUG4 571 aaPredicted RBP13.43□□□□□ -0.26
VCP-207ENST00000493886 SLC28A1O00337 649 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 ULK1O75385 1050 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 MPC1LP0DKB6 136 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 ADH5P11766 374 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 SLC2A4P14672 509 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 IL10P22301 178 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 RPL38P63173 70 aaKnown RBP13.43□□□□□ -0.26
VCP-207ENST00000493886 INPP5AQ14642 412 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 SPATS1Q496A3 300 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 PLEKHS1Q5SXH7 462 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 PPP4R4Q6NUP7 873 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 RNF165Q6ZSG1 346 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 ANKFN1Q8N957 763 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 ASB11Q8WXH4 323 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 LZICQ8WZA0 190 aa13.43□□□□□ -0.26
VCP-207ENST00000493886 HSPBAP1Q96EW2 488 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms